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Information for unigene UN48943
| FASTA Sequence |
| Unigene ID: UN48943 | Length: 846 |
SSR | | TATGTATTAAAACCCTTGAGAATGGTGAATCTAATGACAATGCAGGGTATCTTATATATATATGGCTTCATGTATTGAAAACAAAG
TTGGGGTTTCCATCTGATTGTATTCAGAGATACTGGTAACACAATGAATTGACATTAATAAGCAAAAAAATCAGCTGGTCAGAAAT
AGATAAACCTGCCGGCTTCTCTTTCTCTCTCTCTCTCACCTTGCCTGCTTCATTTCATTCTGCTGTTACCTTGATCTGTCCATAGA
GATTAGGGTCTGCTTCATAGTATACAACATCTCCTTCATCGCTCACAAAATGATCTTCTTTAATACTTTTTGCTAAGATTCCCAGT
AAATGTAATGGCAAAGGTCCAGACTTATCAGGCTCCCTGTAATACTTCCCTAATACTGGTTTAGCTGCTTCCGTTGCTTCTGCTAG
ATGGTAATGTGGGATCTGCGGGAAAAGATGATGTATCACATGAGTTCCAATGTCGTGATGGATGTTGTTGATCAATCCGTAGTCAC
GGTCCAATGTCGTAAGCCCTCCTCTCAAGTAACTCCATTCCTTCCCACGGTACCAAGGGAGCTTATCTTCATGACCATGGTGATGC
AGGTAAGTCACAAAGTCCAACCACATTACATTTATCCAGTAAGGAACTACATAAAGTTTGAGCATTTGCATAGGACCCATCACAAA
GTTGAGGCAGACAAGCAGAGCAGCCATTGCAGTCCAACAAGCGGTAGATGTGAGAACATCATTTCTCTCTTTAGGGAGGAACAAGT
CGCTGTCCGGATGGTAATGAGAACCCTTCTTCCCCGGACTTCTTGCCCACAGTAGAAAGGGTAAGCGAGCAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| P48618 RecName: Full=Omega-3 fatty acid desaturase, chloroplastic; Flags: Precursor | 1107 | 8e-119 |
| AAA61774 omega-3 fatty acid desaturase [Brassica napus] | 1107 | 8e-119 |
| ACS26170 chloroplast fatty acid desaturase 7 [Brassica napus] | 1104 | 2e-118 |
| AAT02410 chloroplast omega-3 fatty acid desaturase [Brassica napus] | 1091 | 6e-117 |
| CAB85467 chloroplast omega-3 fatty acid desaturase [Brassica juncea] | 1069 | 2e-114 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48618 Omega-3 fatty acid desaturase, chloroplastic (Fragment) | 1107 | 4e-120 |
| P46310 Omega-3 fatty acid desaturase, chloroplastic | 1057 | 2e-114 |
| P48622 Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic | 992 | 8e-107 |
| P48619 Omega-3 fatty acid desaturase, chloroplastic | 950 | 6e-102 |
| P48620 Omega-3 fatty acid desaturase, chloroplastic | 899 | 5e-096 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C5J3R0 Chloroplast fatty acid desaturase 7 | 1104 | 1e-118 |
| Q6PN70 Chloroplast omega-3 fatty acid desaturase | 1091 | 4e-117 |
| Q9M4D4 Chloroplast omega-3 fatty acid desaturase | 1069 | 1e-114 |
| B4X945 Chloroplast omega-3 fatty acid desaturase | 1064 | 5e-114 |
| A1E436 Omega-3 fatty acid desaturase | 1058 | 3e-113 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G11170.1 FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase | 1058 | 2e-115 |
| AT5G05580.1 FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase | 992 | 7e-108 |
| AT2G29980.1 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 774 | 1e-082 |
| AT2G29980.2 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 330 | 4e-031 |
| AT3G12120.1 FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase | 274 | 1e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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