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Information for unigene UN48944
| FASTA Sequence |
| Unigene ID: UN48944 | Length: 975 |
SSR | | TTTTTTGTTTTTGTTTTACCACCGGACTTTTGCTTTTCCAGGTTCCAAAACGCATCTCCTCCTCCGTCTCCTCGGCTTCCTCGTCA
CGCAACCTTCGAACGACCGAAAGCTATGAAGATCACCGCCTTGCTCGTTCTCAAGGCCGCCCCCGAAACATCGGATCCAGTCATCC
TCGCAAGCGCCTCGGACGTCTCTCACTTTGGCTATTTCCAGCGATCCAGCGTCAAGGAGTTCGTCGTCTTCGTCGGCCGAACCGTC
GCTAGCAGAACACCTCCTTCCCAGCGCCAGTCCGTCCAGCACGAAGAGTACAAGGTTCATGCTTACAATAGAAATGGGCTTTGTGC
GGTGGGCTTCATGGACGATCATTATCCTGTTCGAAGTGCCTTTTCTCTTCTCAATCAGGTGATAGATGAGTACCAGAAGAGTTTTG
GTGAGACATGGAGGTCTGCTAAATAAGACTCCTCTCAGCCCTGGCCTTACTTAGCCGAAGCTCTTACCAAATTCCAGTACCCAGCA
GAGGCTGATAAGCTGTTGAAGATCCAGAGGGAGTTGGATGAGACCAAGATTATCCTTCATAAGACCATTGATAGCGTTCTAGCCCG
TGGTGAGAAGCTGGACAGCCTAGTCGAGAAAAGCTCTGATTTGAGCATGGCATCCCAGATGTTCTACAAGCAAGCAAAGAAAACGA
ATTCATGCTGCACTATTCTCTGAGCTGCAAACTCTCTCTCTCTGGATGTCTTGGGTATATATATAGTCAACCAAACTTTTGCTGGT
GGCGAGGCGAGACTACAGTTTATCATCATTTTATAATATAAGATTTGAATCCCTTCTCTCGTTTGCATGCACTTTGAATATTCCAT
AAGACTCATGTCGTGTGGCGTGTTATCCAAATACAGTTTCTATCGTCTCTACTCTCTACCAAAGATTATATGATTGCTTTTGTTTA
TGTTTTCTAATGGTAACAACATTTATCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864547 hypothetical protein ARALYDRAFT_495912 [Arabidopsis lyrata subsp. lyrata] | 974 | 3e-103 |
| NP_200614 VAMP-like protein YKT61 [Arabidopsis thaliana] | 964 | 4e-102 |
| XP_002309328 predicted protein [Populus trichocarpa] | 918 | 8e-097 |
| XP_002324554 predicted protein [Populus trichocarpa] | 915 | 2e-096 |
| XP_002523504 snare protein ykt6, putative [Ricinus communis] | 911 | 5e-096 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZRD6 VAMP-like protein YKT61 | 964 | 2e-103 |
| Q9LVM9 VAMP-like protein YKT62 | 805 | 5e-085 |
| Q757A4 Synaptobrevin homolog YKT6 | 475 | 9e-047 |
| Q6FW27 Synaptobrevin homolog YKT6 | 462 | 3e-045 |
| Q6C537 Synaptobrevin homolog YKT6 | 458 | 8e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HAR1 Predicted protein | 918 | 6e-097 |
| A9PAX2 Predicted protein | 915 | 1e-096 |
| B9SBY5 Snare protein ykt6, putative | 911 | 4e-096 |
| C6SYY8 Putative uncharacterized protein | 905 | 2e-095 |
| C6SVB1 Putative uncharacterized protein | 904 | 2e-095 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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