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Information for unigene UN48968

FASTA Sequence
Unigene ID: UN48968Length: 1049 SSR 
GGGCTTTGATAAATATCATTAATAAAATCATACATTTAATGATAAACCTATCATAATATGAGAAAAGGAAACAGAGAAAGAGAGGG
AGGGTGAGATGCTGTAGATTACAATCAACTCATCTCCTAGTCTCTTGTGTATATCCATACATCTCTATTGCTTTGGGTGAGAGTAT
TCCTAAGGATCTGAATACGTGATCAAGTGTGTTTGTGTTCTAGAGTAACAATAAGCTATAACCATTTGACTGATGCCTCCTCCAAA
TGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCGTTGTCCTGCTCTTCGACCTGGGTTTCTTGAAAACTGGATCTGCAAATT
TTGGAGTCCGGTTCATTTTCATCCATTCTATAGCCTTGCAGGGCGGTACGAGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAAC
AAAACATAGAACAACAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCTTTATATCCCAAAAACGGTCGAA
ATATATGAGATACTTCCCTCCTGGAGCAATTAGAAGGAAGTCCTTCAACAAATAGAGTGTTGGATGCATCTGGAGGCAGACGAAGC
AGTTCTCTTCCGGGCCTACCAACTAAATCTTGTTGACCAAACCCCAAATCTCGACCATTTGGAGGCCCAAAATCTGGATGCTGAAC
TCCACCACGCCCAGACATAAGCTCACCCATGTCACCTCCTCTGCCGACACCATGAAACCGACCAGATTCTTCAGATGGCCTAGAAG
ACGTTTGCGCACTCTGAAGGTAGCGATCATAAGCTGAGCCAATAGTTCTCGTATCTCTTACTGAATGAAGTATACCTCGATCCTCA
TCCCGTGACACGTAATCATGGTCGAAGTCAGAACGGTGACGTTTCAGAGGACCTCCGTGTGGGATCGACGACATCGGAGGCTGGTC
CCGGTACCCATCTGCCATTGACGACGACGACGACGACGACGGCGACTGAAACAATACTTTCTAATTTTCGCCCGATTTCGATTTCA
ATTGGAGATTAACTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177820 RNA recognition motif-containing protein [Arabidopsis thaliana]5891e-058
XP_002889109 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata]5811e-057
ACU23298 unknown [Glycine max]5192e-050
NP_173554 nucleic acid/nucleotide binding protein [Arabidopsis thaliana]5074e-049
NP_001154354 nucleic acid/nucleotide binding protein [Arabidopsis thaliana]5074e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q9W6I1 RNA-binding protein with multiple splicing1254e-006
Q4WJT7 Multiple RNA-binding domain-containing protein 11245e-006
Q9YGP5 RNA-binding protein with multiple splicing1228e-006

TrEMBL top hits (Blast detail)Scoree value
A1A6K6 At1g769405899e-059
C6TK58 Putative uncharacterized protein5191e-050
B9RQ14 Nucleic acid binding protein, putative4572e-043
Q8GYL1 Putative uncharacterized protein At1g76940/F22K20_234411e-041
C6TF78 Putative uncharacterized protein4161e-038

Arabidopsis top hits (Blast detail)Scoree value
AT1G76940.1 RNA recognition motif (RRM)-containing protein5895e-061
AT1G21320.1 nucleic acid binding / nucleotide binding5072e-051
AT1G21320.2 nucleic acid binding / nucleotide binding5072e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information