Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN48969

FASTA Sequence
Unigene ID: UN48969Length: 1253 SSR 
TTTTTTGGATTTTGACGCAAAAACGCAATGAGCTCAGCTTCAGTTATCCACCACCACGGAGTTCTCGCTCCGGCAAAACAGGATCG
AATCTTTGTTAGCATTCCGGTGATTACGCCGAACTTCCGAGTTCGTGGATGGACTGAGTCTCCTTTCTCTCTCGTTTCAGCTGCAA
ATCGTCGTCTTTCTCCTATTGCTTGCTCCCGAGGAACTGATCAGGAAGATGATCTTTCTTCTTCTTCTTCTTCAGAGAAGGAGAGC
AGAGATCTTGTACCACATGATAAAGACCTGAGAGATACTACTCTACAAGATGAGTCTTACAAAACTTCCTTCAAGACTGTTGCCTT
GTGTGTAAGCGCTGCGGTGGCATTTGGAATCGGAATAGGTTTGAAAGAGGGTGTTGGCAAGGCATCTGAGTTTTTTGCAGGCTATT
TATTGGAACAAAGCTTGTCAGTGGACAACTTGTTTGTTTTTGTTCTCGTCTTCAAATACTTCAAAGTGCCCCTCATGTATCAGAAC
CGGGTGCTTTCCTATGGTGTAGCTGGTGCAGTTATCTTTCGCTTCACCCTCATATTAATAGGAACAGCTACTCTTCAGAAATTTGA
AGCAGTCAACCTACTACTAGCAGCAGTTCTCTTATATTCATCTTTCAAGTTATTTTCAAGTGAAGAAGATGATTCAGATCTATCCG
ACAATTTCATTGTGAAGACATGCCAGAGATTTATTCCCGTCACATCAACTTATGATGGGAATCGTTTTTTCACAAAGCATGAAGGC
ATTTGGAAAGCGACACCGTTGCTTCTCACAGTAGCAGTGATCGAGCTCAGTGACATAGCATTTGCTGTTGACTCGATACCAGCTGT
TTTTGGCGTCACAAGGGATCCTTTTATTGTCTTGACCTCTAATCTCTTTGCAATCCTAGGACTAAGGTCTCTCTATACCCTGATTT
CTGAAGGAATGGACGACCTGGAATACTTGCAGCCATCAATAGCAGTGGTTCTTGGCTTCATCGGATGCAAGATGATCCTCGATTTC
TTTGGCTTCCATGTATCAACCGAGGCATCACTTGGTATCGTGGCGCTTTCTCTCAGCACTGGGGTACTATTGAGCCTAACAAATAA
ATCCGGTGACAGCTAACTAAGAACGTGGAAGAGACTACAGATGAAGCCAATTCAAAGAACAAAATCTAGTTGTTCATTAAATCATT
ACACAGATGTGTTACTGTAGATATAAAACAGAAAAGGGTTCGTTAAATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871513 PDE149 [Arabidopsis lyrata subsp. lyrata]15247e-167
BAB10031 unnamed protein product [Arabidopsis thaliana]12925e-140
NP_568257 TerC integral membrane domain-containing protein [Arabidopsis thaliana]12925e-140
AAM64468 transmembrane transport protein-like protein [Arabidopsis thaliana]12853e-139
XP_002326155 predicted protein [Populus trichocarpa]12576e-136

Swiss-Prot top hits (Blast detail)Scoree value
P96554 Uncharacterized membrane protein STKORF3195207e-052
P60067 Inner membrane protein alx5072e-050
Q8XAJ0 Inner membrane protein alx5054e-050
Q8FDE1 Inner membrane protein alx5054e-050
P42601 Inner membrane protein alx5054e-050

TrEMBL top hits (Blast detail)Scoree value
Q9FMP9 Similarity to transmembrane transport protein12924e-140
Q8LCU5 Transmembrane transport protein-like protein12852e-139
B9MT63 Predicted protein12574e-136
Q60F47 Os05g0121200 protein10504e-112
B8AXC1 Putative uncharacterized protein10495e-112

Arabidopsis top hits (Blast detail)Scoree value
AT5G12130.1 PDE149 (PIGMENT DEFECTIVE 149)15351e-170

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  100%

Unigene MembersMember information