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Information for unigene UN48997
| FASTA Sequence |
| Unigene ID: UN48997 | Length: 749 |
SSR | | GGGACGTTAACCCAATCTTCTTCGTCGTCTGCGTTAAAGAGAAGAAGAAGAACACCTCTCTCTCTCTCTCTCTTATCTCACCTCTG
TGATTCTCAGAAAATGTCAATCCTGCAGCTCTCTAGCTCTTCTCTCTCTTATCCTAATGTTCTCTCCATCTCTCCGAGAAAATCTC
TGTCGTCGTCTCCGAAGTCGTCTTCCCGAACAATTCGTTGTTCCCTCGAGGGAACCACTGTAACTGAGCGGAAAGTGTCTGCAACC
ACCGAGCCTCTTCTTCTGAGAGCTGTCAAAGGTGAAGTTGTTGACAGACCTCCCGTTTGGCTTATGAGGCAAGCTGGGAGGTACAT
GAAGAGTTATCAAGCTCTCTGTGAGAAGTATCCTTTATTCCGGGACCGATCAGAGAATGCAGATCTTGTGGTGGAGATTTCTCTTC
AACCCTGGAAGGTGTTCAAGCCTGATGGTGTGATTCTGTTCTCAGACATTCTCACTCCTTTGTCCGGAATGAACATACCTTTCGAC
ATTGTCAAAGGAAAAGGTCCCATCATCTTCAACCCGCCGCAGTCAGCTGCTGACGTGAATCAAGTCAGAGAGTTTGTACCGGAGGA
ATCTGTTCCTTATGTTGGAGAAGCACTCAAGAGATTAAGAAACGAGTGGGCAACGAAGCTGCTGTTCTTGGCTTTGTTGGAGCTCC
TTTTACTCTCTCCTCATATGTTATTGAAGTGGCTCATCTAAGACTTCACACAGATCAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181581 Uroporphyrinogen decarboxylase 2 [Arabidopsis thaliana] | 818 | 2e-085 |
| AAK59562 putative uroporphyrinogen decarboxylase [Arabidopsis thaliana] | 818 | 2e-085 |
| XP_002879873 hypothetical protein ARALYDRAFT_903342 [Arabidopsis lyrata subsp. lyrata] | 811 | 1e-084 |
| XP_002520842 uroporphyrinogen decarboxylase, putative [Ricinus communis] | 638 | 2e-064 |
| XP_002274385 PREDICTED: similar to Uroporphyrinogen decarboxylase, chloroplastic [Vitis vinifera] | 630 | 1e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22886 Uroporphyrinogen decarboxylase 2, chloroplastic | 818 | 1e-086 |
| Q42967 Uroporphyrinogen decarboxylase, chloroplastic | 612 | 7e-063 |
| Q10LR9 Uroporphyrinogen decarboxylase 2, chloroplastic | 571 | 4e-058 |
| Q42855 Uroporphyrinogen decarboxylase (Fragment) | 527 | 5e-053 |
| O81220 Uroporphyrinogen decarboxylase, chloroplastic | 522 | 2e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q94C92 Uroporphyrinogen decarboxylase | 818 | 1e-085 |
| B9S4C3 Uroporphyrinogen decarboxylase | 638 | 1e-064 |
| B7FIJ3 Uroporphyrinogen decarboxylase | 629 | 1e-063 |
| C6TEE8 Uroporphyrinogen decarboxylase | 618 | 2e-062 |
| C5X0S2 Uroporphyrinogen decarboxylase | 586 | 1e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G40490.1 HEME2; uroporphyrinogen decarboxylase | 827 | 8e-089 |
| AT3G14930.1 HEME1; uroporphyrinogen decarboxylase | 401 | 2e-039 |
| AT3G14930.2 HEME1; uroporphyrinogen decarboxylase | 401 | 2e-039 |
| AT3G14930.3 HEME1; uroporphyrinogen decarboxylase | 321 | 4e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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