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Information for unigene UN49003
| FASTA Sequence |
| Unigene ID: UN49003 | Length: 975 |
SSR | | GGTCATGAGCGAGCTCTTCGGGAAAGTCACCGGTTGCTGCAGAGGCCAAGGTGGGTCCATGCACATGTTCTCTAAAGAACACAACG
TGCTCGGTGGGTTCGCCTTTATCGGAGAAGGCATCCCTGTCGCCACCGGTGCTGCTTTCACTTCCAAGTACAAGAGGGAAGTCTTG
AAACAGGGTTGCGAAGACGTCACCGTTGCGTTTTTTGGAGATGGGACTTGTAACAACGGGCAGTTCTACGAGTGTCTCAACATGGC
TGCGCTTTATAAGTTGCCTATTATCTTTGTTGTTGAGAATAACTTGTGGGCGATTGGGATGTCTCATTTGAGGTCGACTTCTGATC
CCGAGATATGGAAGAAAGGACCTGCGTTTGGGATGCCTGGTGTTCATGTCGACGGTATGGATGTGCTGAAGGTGAGGGAAGTGGCT
AAAGAGGCAGTGGGAAGAGCTAGGAGAGGTGAAGGTCCAACCTTGGTGGAGTGTGAGACTTACAGGTTCAGAGGACACTCCTTGGC
TGATCCTGATGAGCTCCGTGATGCTGCTGAGAAAGCCAAGTACGCGGCTAGAGACCCGATCACAGCACTGAAGAAGTATTTGGTAG
AGAACAAGCTTGCTAATGAAGGGGAGCTTAAGTCGATAGAGAAGAAGATAGACGAGTTGGTTGAGGAAGCGGTTGAGTTTGCAGAC
GCGAGTCCACAGCCTGGTCGAAGTCAGTTGCTAGAGAATGTGTTTGCTGATCCCAAAGGGTTTGGAATTGGACCTGATGGGCGTTA
CAGATGCGAGGATCCCAAGTTTACTGAAGGCACTGCTCAAGTTTGAGACAAGAGATAAAGAGAGAGAGAGAGAGTTAAATTATAAC
GTCTTTGGCTTCTGTTTGATGTTTTCTTACATATTATGAAGTTAAAATGCCACAGAGAAACAGTTTGTATCGTCTGAAGTTTTTTT
TTTCCTGGCTGGATGGTTTTATGATTTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889385 PDH-E1 alpha [Arabidopsis lyrata subsp. lyrata] | 1391 | 1e-151 |
| NP_171617 pyruvate dehydrogenase E1 component subunit alpha [Arabidopsis thaliana] | 1384 | 8e-151 |
| XP_002267676 PREDICTED: similar to putative pyruvate dehydrogenase E1 alpha subunit [Vitis vinifera] | 1315 | 8e-143 |
| XP_002515074 pyruvate dehydrogenase, putative [Ricinus communis] | 1314 | 1e-142 |
| AAF26472 T25K16.8 [Arabidopsis thaliana] | 1313 | 1e-142 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q1XDM0 Pyruvate dehydrogenase E1 component subunit alpha | 845 | 1e-089 |
| P51267 Pyruvate dehydrogenase E1 component subunit alpha | 831 | 5e-088 |
| Q1RJX4 Pyruvate dehydrogenase E1 component subunit alpha | 552 | 1e-055 |
| Q4UKQ6 Pyruvate dehydrogenase E1 component subunit alpha | 549 | 2e-055 |
| Q92IS3 Pyruvate dehydrogenase E1 component subunit alpha | 544 | 9e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O24457 At1g01090/T25K16_8 | 1384 | 5e-151 |
| B9RNK3 Pyruvate dehydrogenase, putative | 1314 | 7e-143 |
| Q9MAM6 T25K16.8 | 1313 | 9e-143 |
| B5LAW2 Putative pyruvate dehydrogenase E1 alpha subunit | 1311 | 2e-142 |
| A9PF50 Putative uncharacterized protein | 1308 | 3e-142 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G01090.1 PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase (acetyl-transferring) | 1385 | 2e-153 |
| AT1G59900.1 AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) | 484 | 7e-049 |
| AT1G24180.1 IAR4; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) | 467 | 7e-047 |
| AT5G09300.1 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative | 256 | 2e-022 |
| AT5G09300.2 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative | 256 | 2e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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