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Information for unigene UN49009
| FASTA Sequence |
| Unigene ID: UN49009 | Length: 1503 |
SSR | | GGATTCTTCTTCATTTATAGTTCTTTGGTTCTCTCTCTCTCTCTCTGTGAATAATCTGTTCTACAAAAAACAGCTCAAGAAACCAT
TTTGTATGGTCAGAAAGGGCAAAGCAAGCCTTATTCTTCGTTTGCTTCCATTCTCTACTAATGGGTTCTTGCCTCAGCTCTCGTGT
TGACCATAAGAGCAGTAGTCTCGACGCCCTGAGTTATCAATCATCATCCTCACCGGCGGCTGATAAGAGAGAAGGAGAGATACTTA
GCAAAGCCAACGTTAAGAGCTTCACCTTCAACGAACTAAAACTCGCAACGAGAAACTTCAGATCGGACTCTGTTGTCGGAGAAGGC
GGTTTCGGTTCTGTCTATAGAGGTTGGATCGATCAGACAACCCTCGCTCCGACTAAGTCAAGTAACGGTCTTTTAGTTGCTGTCAA
GCGTCTTAACCCTGATGGCTTTCAAGGTCACCGAGAATGGCTGACAGATATCAACTACTTGGGACAGTTAAGTCACCCGAACTTAG
TTAAACTGATTGGTTATTGCTTGGAAGATGAACAACGGCTTCTTGTGTATGAGTTTATGCACAAGGGTAGTCTTGAAGATCATCTC
TTCACAAATGATGTGAAGTGTAAGCCACTCTCTTGGTTATTACGGGTTAAGGTTGCACTTGATGCAGCTAAGGGGCTTGCGTTTCT
TCATAGTGACCCTGTTAAAGTCATATACCGAGACATCAAGCCTCAAACATCTTGCTCGACTCGGACTTCAATGGGAAACTTTCAGA
TTTTGGGTTAGCAAGAGACGGTCCAATGGGAGAAACAAGCTATGTTAGTACAAGGGTCATGGGTACATTTGGCTATGCTGCTCCTG
AGTATGTGTCAACAGGTCACTTGAATGCCAAAAGTGATGTGTACAGTTTCGGGGTTGTGCTTCTAGAAATACTCTCTGGAAGGCAA
GCATTGGACCATAGCCTACCGACCAAGGAGCAAAACCTTGTGGACTGGGTACGACCATACCTCACAAGCAAGCGAAAAGTTCTACT
AATGGTGGACACTCGTCTTAAGTCACAGTACAAACCCGAAGAGGCAGTGAGAATGGCAAGCATTGCTGTGCAGTGCATTTCATTTG
AACCAAAGTCACGACCAACCATGGACCAAGTGGTCCGAGCCTTGATGCAACTGCAGGCGAGCATGGTTTCCGGCTAAAGTTGACAC
AAGTAAAGATATCAAAAGACTTGTGGGATTGTAGTAGGTATATAAAGAGATGTGGTTGCTGACAGTGGCTAGGTCTCATGTCTCCT
CGTGTGGTGGTGTAAGATTCCATTTTCTTCCACGAAACAAACACTTAAGCTACATACATGACATGTTTTGAAAGATGTGTTCACAA
TACTTTTTCTTTCAAAACTCCTTGATGTATCCAATGTCTGCTTGTAGATTCTTTCTAGGAAATATTTTTGGAGTATTTCTCTGTAA
TATTTTAAGTTAAAATTTGAGTCTATAAATATTTTTGGAGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879808 botrytis-induced kinase1 [Arabidopsis lyrata subsp. lyrata] | 722 | 8e-074 |
| NP_181496 serine/threonine-protein kinase BIK1 [Arabidopsis thaliana] | 714 | 7e-073 |
| XP_002876303 hypothetical protein ARALYDRAFT_485972 [Arabidopsis lyrata subsp. lyrata] | 700 | 3e-071 |
| CAB75903 serine/threonine-specific protein kinase-like [Arabidopsis thaliana] | 694 | 1e-070 |
| AAO29965 serine/threonine-specific protein kinase -like [Arabidopsis thaliana] | 694 | 1e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8H186 Probable receptor-like protein kinase At3g55450 | 819 | 2e-086 |
| O48814 Serine/threonine-protein kinase BIK1 | 714 | 3e-074 |
| O49840 Protein kinase 2B, chloroplastic | 613 | 2e-062 |
| P43293 Probable serine/threonine-protein kinase NAK | 613 | 2e-062 |
| P46573 Protein kinase APK1B, chloroplastic | 612 | 2e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B8AWZ2 Putative uncharacterized protein | 653 | 6e-066 |
| A3A207 Putative uncharacterized protein | 650 | 1e-065 |
| B8A9X9 Putative uncharacterized protein | 650 | 1e-065 |
| Q5JM84 Os01g0973500 protein | 650 | 1e-065 |
| Q65XV8 Os05g0110900 protein | 646 | 4e-065 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G55450.1 protein kinase, putative | 819 | 2e-087 |
| AT2G39660.1 BIK1 (BOTRYTIS-INDUCED KINASE1); kinase | 714 | 3e-075 |
| AT2G28930.1 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 625 | 5e-065 |
| AT2G02800.1 APK2B (PROTEIN KINASE 2B); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 613 | 1e-063 |
| AT2G02800.2 APK2B (PROTEIN KINASE 2B); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 613 | 1e-063 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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