 |
Information for unigene UN49012
| FASTA Sequence |
| Unigene ID: UN49012 | Length: 1401 |
SSR | | GGGGATCTAGGGTTGAGTCGAGGGGTAACTCACCGGCGATTTTGCGAGATGGGAAGAGACCGCGACGACTCTCCGCCGGAGAAGGC
GAGATGCGACGACGAGGATAAAGACAACAGAAGAGAATCATCCCGGGAGAAATCGAGCCGTATCGAAAAGAAGTCGGTCGAAGAAG
AAGTGAGTCGGCGCGAATCGTAGAGAAAATCAAAAGACGGCAGAGACTCCGATTCTGGTTCGGGACTGGAGAGTGGTAGCGAGTCC
GAGTCGGAGAAGGAAGAGAGACGTAGAAGTAGCAAGTCGAGAGGGAAAAGGAAATCAGATCGGAGATCTCGCAGTAGTAGTAGACG
AAGCAGGAGACGCCGCGATGATTCCAGTAGTAGCTCGGAATCGGAATCTGAGTCGGAGTATTCGTCTGAGTATTCGGATTCCGAGG
AGAGCGAGAGTGAGGATGAGCGAAGGAGAAGGAAGAGGAAGAGAAGGGAGAGGGAGGAGAGAGATAAGAAGAGAAGGAGGAGAGAG
AAAGAGAAGAAGAAGAAGAAGAGAAGGAAGGAGAAAGGAGATGATAGCAGCAAGAAGAAGAAGCGGAAGAAGGAGAAGAAGTCTGA
GAAAGCCAAGAAAGGAGCTGTTACTGAATCTTGGGGCAAGTATGGAGTCATCAGAGAGACTGATATGTGGAATAAACGACCAGAGT
TCACAGCATGGCTGCTTGAAGTAAAAGAGGTCAACTTGGAAAGCTTGCCACCATGGGAAGAGAAGAAAATGTTTAAAGATTTCATG
GAAGATCACAATACTGGTACATTTACCTCCAAGAAGTATTATGACATTGATGGTTACTATAGACGTAAGTTGGAGAAAGAGATGAA
GAAGGGTTTGAAGAAAGCTGGGCAGAGTGAACGGACTGTGTTCAATGACGAGGAGCAACGCCGGCTAGAGATGCAGGAAGCACGCG
AAAAGCAGAAGGAAGAAGAAGTTTTAGCTCTAAAGCGATCAATGGAAGGCGGAATGGCTCAAGCTATGAAGGAACAAGCTCGGCTT
AAGGAAGAAATGGTCTACTTGTACAAGATTGGGGACATGGAGGGTGCAAATGCTATTCAGAAAAGATTGGATCCAGATGTTCCCAT
GTAATGTGGAGCTTTTGGTTTAAGCTACAACATCTTCTAGTTCTCGTTTTTAAGCTGTGTTCCAAGTATCGAGCTTGTGTAACACG
GCAATAAGAAGAAAAAGCTAAAACTTTCATCTCTAGAGCTTTAAAGCATGATCTTGCCTTTTTTGGATATTATACACCATCGGCTA
GTCAAGTATTGAAAACCGTTATGCTTTCCAGACTGTGTCTGTGACAAAGAAGAAAAATTGGACTCTTCCTAGAAATGGACCCTATG
CAAATATATGTTGCAACAATGATGC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568799 uncharacterized protein [Arabidopsis thaliana] | 1403 | 8e-153 |
| AAM63475 unknown [Arabidopsis thaliana] | 1400 | 2e-152 |
| XP_002864283 hypothetical protein ARALYDRAFT_331729 [Arabidopsis lyrata subsp. lyrata] | 1304 | 3e-141 |
| BAB09552 unnamed protein product [Arabidopsis thaliana] | 1113 | 4e-119 |
| XP_002282222 PREDICTED: hypothetical protein [Vitis vinifera] | 961 | 1e-101 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B2RY56 RNA-binding protein 25 | 234 | 1e-018 |
| A1A5I1 Protein FAM133 | 229 | 5e-018 |
| Q8H0U8 DEAD-box ATP-dependent RNA helicase 42 | 229 | 5e-018 |
| Q54QQ2 Uncharacterized protein DDB_G0283697 | 216 | 2e-016 |
| Q55FI4 Nucleolar protein 58 | 212 | 4e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCP8 Putative uncharacterized protein | 1400 | 1e-152 |
| Q9FHZ6 Genomic DNA, chromosome 5, P1 clone:MGN6 | 1113 | 2e-119 |
| B8ASD2 Putative uncharacterized protein | 954 | 7e-101 |
| Q7X8Y1 OSJNBa0074L08.19 protein | 954 | 7e-101 |
| B9SNN8 Nucleic acid binding protein, putative | 952 | 1e-100 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
