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Information for unigene UN49045

FASTA Sequence
Unigene ID: UN49045Length: 1871 SSR 
TTCCCTACGTATAGATTAGTTTCCTTACTGGCCTTAGCACGGCGCAACGCGTTTTCCATCAGACACATGTAAAAGTCTTATCTCTT
CTCTTGTCATAAATCTGTCTTCTCGTCAAACTTCCTCCTGTTTTTCTGATACTCTCCTCCTATTATCTAAATATTCAGATCCAACA
ACTCTAGATAGATATTCCATCATCTTCTTGCGTCATCCTGCTCAACTCTCACGTTCTTACTCTGTCCATGAATGAGAAACGAAGAT
CCACCGTTAGTTCGATACCAAAGATGCGTTCTCTTGCGGCTATTATACTCCTTCTCAGCTTCAGTTCATGTTATTCTCTTAAGGAA
GAAGGTACGTCAAGCTTTCTTGCATGTTTTGTCTCAACAAGTTCCCTGAGAATATGTTTTTCATCCTCCTCCGTTGCGCTTTGTGT
TTTCAGGTTTAGATAAAGATAGATTAGAGAAAGATCTTTGGTCTGATGAAGATTCTGCGATTCTGTAAGTCCATTTATCTTGTTTT
GGTATAACAACAACTTGAACTTGTATTTGGTGGTTGGTAGGTAGATCTATACAGTTTCTCTAGTCATTCCATAACTTGAGTAACTT
CACACACACACAACTATTATTAATTAGTATTATTGATCCTACTAAATGTTGTGAACAAACGCGAATCAAAAAGAAAACTGAAGCAA
ATATCCGTTATAGGTTTGTATATTGATTATGTAAATGAATAATTTTGTCAATCTACCTAGGATCAATTTTGTAACACTAAATTTTT
TTTTTTTGTTCAACAAATTAAACACTAAATATGTTGTGCTTTTAATCATTTTGATTAACTTGTTAGATCGTGTTGCAAAGACCTTA
CCTTATTTTATTTCTTTATTTTTACTTTCTGTAGGAAAGCTGTTGGGTTTCACAGGAAAGCACTTGCACCTCGTAGCCCAGTATCA
TACGACAAGTTGCCTTCCAGAAGAAACAGCAGTGAGGCTGGGGCTGCAACTATCACTCCACCATCATCATCCCCACAACCTTCTCA
AAAGAATGTCTCAACTCAATCCTCAACAGCTTTGGATCCAGGAACTACACAAGATGTTTCTCCTTCACCTCCTCCTCCTCCTCCGT
CTGTTCCCGAAGCAAGCTCTCCCACTCCAAGAACCTCTGCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCAGTGGTTGGTCCTGTA
GTTGCTGCCTGCGTAGGCGGTGTTGTTCTTATCATCCTTGTAGCTACCGGTGTGTTCTACTTCAGAAGAAAAGTAGGGAAGTCAGT
GAATCCTTGGCATACAGGTCTTAGCGGTCAACTTCAGAAAGTCTTTGTAACTGGTATCCCTACTCTAAAAAGATCTGAGATTGAAG
CTGCATGTGAAGACTTTAGTAATGTCATTGGATCATGTCCTATTGGTAAACTCTTCAAAGGAACACTATCAAGTGGAGTGGAGATA
GCTGTTGCTTCTATTAACACCACTTGTGCCAAAGACTGGAAGGACAATACAGAGATTCAGTTCAGGAAGAAGATTGAGATGTTATC
CAAGATAAACCACAAGAACTTTGTAAACCTTCTTGGCTACTGTGAAGAAAACGAACCTTTCACCAGGATCTTGATCTTTGAGTATG
CTCCAAACGGTTCACTCTTTGAACATCTACACAGTAAAGAATCAGAACACTTGGACTGGGGAATGAGGCTAAGAATCTCAATGGGG
TTAGCATATTGCCTTGACCACATGCACCAACTCAGCCCACCGATAGCTCACACAAACCTCGTCTCATCATCACTTCACCTCACTGA
AGACTACGCTGTTAAACTAGCCGACTTCAGTTTTGGTCCGTCTGATACAGAAACGTGCAACAACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881709 kinase family protein [Arabidopsis lyrata subsp. lyrata]11701e-125
AAD25942 hypothetical Ser-Thr protein kinase [Arabidopsis thaliana]10284e-109
NP_973647 Protein kinase family protein [Arabidopsis thaliana]10284e-109
NP_565925 Protein kinase family protein [Arabidopsis thaliana]10284e-109
NP_191164 Protein kinase family protein [Arabidopsis thaliana]10275e-109

Swiss-Prot top hits (Blast detail)Scoree value
C0LGQ4 Probable LRR receptor-like serine/threonine-protein kinase MRH17314e-076
C0LGU7 Probable LRR receptor-like serine/threonine-protein kinase At5g458407243e-075
C0LGH8 Probable LRR receptor-like serine/threonine-protein kinase At1g634304018e-038
Q9LT96 Probable leucine-rich repeat receptor-like protein kinase At5g497702942e-025
C0LGH3 Probable LRR receptor-like serine/threonine-protein kinase At1g561402404e-019

TrEMBL top hits (Blast detail)Scoree value
Q3EBJ0 Putative uncharacterized protein At2g40270.210283e-109
Q9SIZ4 At2g40270/T7M7.1510283e-109
Q9XEF4 Hypothetical Ser-Thr protein kinase10283e-109
Q9LYN6 Putative uncharacterized protein10273e-109
B9SQR1 Receptor protein kinase, putative8445e-088

Arabidopsis top hits (Blast detail)Scoree value
AT2G40270.2 protein kinase family protein10281e-111
AT2G40270.1 protein kinase family protein10281e-111
AT3G56050.1 protein kinase family protein10272e-111
AT3G56050.2 protein kinase family protein10272e-111
AT4G18640.1 MRH1 (morphogenesis of root hair 1); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase7314e-077

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
211  33%

Unigene MembersMember information