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Information for unigene UN49047

FASTA Sequence
Unigene ID: UN49047Length: 1440 SSR 
GGATCGAAGCAACGAAACCTAAACTCACAAAAACCTAAAAGCAAACCTAGTGGACGACGGCGAGAGGAGGAGAAGAGAGAAACTCA
GATCTTTTGTCATGGCACCGAAACAGTCTGACAAGATCGATAACCCTCCTCCGGCTGCCTCTTCCAGCGAAGAAGAAGAAGAAGAA
GAGTCCGGCTCATCCGGAGAAGAAGAAGAATCCGGATCTTCCGACGACGAAGCTGGAGATATCCAGTCCAAGCTCACTCAGAAACC
TCCTCCTCCTCCTGCTACAAAGAAGACTCCCGAATCCGATTCCGAAGAAGACGAATCCGATTCCGATTCCGATTCCGAACCTCCCA
CCAAAACCAAGCCTCTCAACACCGTCACCTCCAAACCAAAGCCAGAGACCTCCGGATCCGTCGCTACGTCTCTCCCCGAGAGCTCC
ACTGCAGCCAAACGCTCCCTAAAGCAAGCATACGACGAAGAGCCTAAGAAGAAGGCGAAGACGACAACAGAGAATGTAAAGAAGAA
GAAGGATGAAGAGGTTAAGAAGATCTCCGGAGAAGACGCGAAGAAGATGTTCCAGAGACTGTTCAGCGAGACAGACGAGATCGCCA
TGCTTCGTGGCTTTCTCGACTTCACCTCCACTAGAGGCGACCCTTACGAGAACATGGACGCTTTCTGCGATTACGTCAAGACCTTG
ATCGATTTCAACGCTTCCAAGGCTCAGATTGTCACTAAGCTACAGAGGTGTAAGAAGAAGTTTGTGAACATAGTGAAGAACGCGCT
TAAGAAAGGCAAGACCGAGGATAAGGTCACGTGTTCCAAGGATCTTGACCAGAAAGCTTTCGACTTGTCAAGGAAGATTTGGGGAG
CTAGCGGTGTTCTCCCTGCCAAACCGAGGAAGAAGTCTTCGAAAGAGGATGTGAAGTCTCCTCCTTCGCCTTCGCACACGCCTAAG
AAACTGGAGAAGCAGAAGGGGGTTGTTATTGTGGATGATGCTCAGCTCTCGTCGAGTAGAGAGATGGCGTTGTTCTTCAAGGCGGA
GAATGTGAGTTGTTTTGGTTTGGATGAGTCTACGGTGAGTGCGGTTTGGGATATGGTTGAGGATGGACCGAAGAAGAGGGAGATGG
AGGAGAAGCTGAAGAATCTCAAGGCTATGCAGGTGGAGCTTTGTTTGCAGAGAACTGCATTGTTGGACACCACTGCAAAGATGATA
TTCAAAGACAATGCGTCGTCCTCATATTGATGGTTTGTTCTTTTTTTTTCTTACTCTTTTTTTTTAGTATGCATAGCTTGTGGAAC
TAATGCTATCGTTAAGTCTTAGTCGATATTTTTATTCTTACACCCTTTATGTTGTTGGATGCTTGGTTTGGGTATAAATTCCCTTA
TGTGGAATGAATATTTATTCCCTTTGTTATATGCTTTTGTGCTAATAGTTTCTTTTTCTATGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869685 hypothetical protein ARALYDRAFT_914061 [Arabidopsis lyrata subsp. lyrata]8742e-091
NP_194251 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]6852e-069
NP_192035 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]5013e-048
AAK62441 putative protein [Arabidopsis thaliana]4333e-040
AAN65068 putative protein [Arabidopsis thaliana]4323e-040

Swiss-Prot top hits (Blast detail)Scoree value
P15771 Nucleolin1444e-008
Q9P785 LisH domain-containing protein C1711.051311e-006
Q4R4J7 Nucleolin1292e-006
O14164 Eukaryotic translation initiation factor 3 subunit C1283e-006
P0C1J6 FK506-binding protein 41264e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SB42 Putative uncharacterized protein AT4g252106851e-069
O04608 A_IG002N01.32 protein5012e-048
Q94F05 Putative uncharacterized protein F24A6.504332e-040
Q8H0X7 Putative uncharacterized protein At4g252104322e-040
O81314 F6N15.6 protein2541e-019

Arabidopsis top hits (Blast detail)Scoree value
AT4G25210.1 transcription regulator6873e-072
AT4G01260.1 transcription regulator5037e-051
AT4G00130.1 INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: transcription regulator (TAIR:AT4G25210.1); Has 54 Blast hits to 54 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).2171e-017
AT5G23180.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.04 four leaves visible, petal differentiation and expansion stage, D bilateral stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: transcription regulator (TAIR:AT4G01260.1); Has 16 Blast hits to 16 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2062e-016
AT5G28040.1 transcription regulator1873e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information