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Information for unigene UN49060
| FASTA Sequence |
| Unigene ID: UN49060 | Length: 1106 |
SSR | | GGGGGGTTTTATAAGATCCAAAAGCAGCTCCGAAGAAGAAGAAGAAGCCGACTGATTTTATCTGAGATTATGGAGAGATTACAGCG
AATCTTCGGCGCCGGTGGCGGTCTGGGTCACGCATCGCCTGATTCTCCCACGCTCGATACGTCGGAGCAAGTTTACATCTCCTCTC
TCGCCCTCCTCAAGATGCTCAAGCACGGAAGAGCTGGAGTTCCTATGGAAGTGATGGGACTGATGCTTGGAGAGTTCGTGGATGAG
TACACTGTTAGGGTTGTTGATGTTTTCGCTATGCCTCAGAGTGGTACTGGTGTTAGCGTCGAAGCTGTTGATCATGTCTTCCAGAC
TAATATGCTCGACATGCTCAAACAGACTGGAAGACCTGAGATGGTGGTGGGTTGGTATCATTCACATCCTGGATTTGGATGCTGGC
TTTCTGGTGTTGATATTAATACTCAACAGAGTTTTGAAGCTTTGAACCAGCGAGCCGTGGCAGTGGTGGTTGATCCGATTCAAAGT
GTGAAGGGGAAAGTAGTGATTGATGCGTTCCGCTCGATAAACCCGCAGACCATTATGCTTGGGCAGGAACCTCGACAGACAACGTC
GAACCTTGGGCATCTGAACAAACCATCGATCCAGGCCTTGATTCATGGACTGAACAGATGGTCTGACGCTAAGACGCTTTGACACC
CACTCCAAGACAAACGAACAGACGGTTCAGGAAATGTTGAACTGGCTGCTAAATATAACAAGGCGGTACAAGAGGAGGACGAGTTG
TCACCGGAAAAACTGGCGATCGTGAATGTGGGAAGACAGGACGCAAAGAAGCATCTGGAAGAACATGTTTCCAACTTGATGTCATC
CAACATTGTTCAGACACTAGGCACCATGCTCGACACTGTTGTCTTCTAGAGAACTTGTTCACTTTACCAGCTAGGAGTACTCTGCT
TCAGTCATTTTGGCTGGAAAGTTAAGCTTCGTTCTTCTGCATCTCTTTTGTTTCTGTTGAATCAACTCTTTATGACTTATCTTATA
GCAAGCATCTGATAAGATTGTATTGTACCAAGTGGTTTCGTTCTTTTCATCAAGGCTATGGATTGATTTCTATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197745 26S proteasome non-ATPase regulatory subunit 14 [Arabidopsis thaliana] | 1017 | 3e-108 |
| XP_002872062 hypothetical protein ARALYDRAFT_489215 [Arabidopsis lyrata subsp. lyrata] | 1017 | 3e-108 |
| AAM64349 26S proteasome non-ATPase regulatory subunit [Arabidopsis thaliana] | 1012 | 1e-107 |
| XP_002284566 PREDICTED: hypothetical protein [Vitis vinifera] | 973 | 4e-103 |
| ABK95816 unknown [Populus trichocarpa] | 973 | 4e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LT08 26S proteasome non-ATPase regulatory subunit 14 | 1017 | 1e-109 |
| O00487 26S proteasome non-ATPase regulatory subunit 14 | 862 | 1e-091 |
| O35593 26S proteasome non-ATPase regulatory subunit 14 | 862 | 1e-091 |
| O76577 26S proteasome non-ATPase regulatory subunit 14 | 854 | 1e-090 |
| Q9V3H2 26S proteasome non-ATPase regulatory subunit 14 | 850 | 3e-090 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WQQ6 26S proteasome, non-ATPase regulatory subunit | 1017 | 2e-108 |
| A5C6V1 Putative uncharacterized protein | 973 | 3e-103 |
| A9PHG3 Putative uncharacterized protein | 973 | 3e-103 |
| B9GNX7 Predicted protein | 973 | 3e-103 |
| B9R7G0 26S proteasome non-ATPase regulatory subunit, putative | 973 | 3e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G23540.1 26S proteasome regulatory subunit, putative | 1017 | 1e-110 |
| AT5G23540.2 26S proteasome regulatory subunit, putative | 768 | 1e-081 |
| AT1G71230.1 CSN5B (COP9-SIGNALOSOME 5B); protein binding | 305 | 5e-028 |
| AT1G22920.1 CSN5A (COP9 SIGNALOSOME 5A) | 301 | 1e-027 |
| AT1G22920.2 CSN5A (COP9 SIGNALOSOME 5A) | 301 | 1e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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