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Information for unigene UN49081
| FASTA Sequence |
| Unigene ID: UN49081 | Length: 881 |
SSR | | GGGGCAGGATCGTTATAGGATTATACGGCACTCTTGTACCCAAAACCGTTGAAAATTTCAGGGCTTTGTGCACAGGTTTCCTACTT
AAATGATTAAATGTTTATTTTGAAATCAGATGCTTCAGTTTCTGATTAAAATGGATCTGAACGCTCGCTAACTTAGGAGAGAAGGG
AAAAGCTTTAAGCGGAAAGCCTCTACATTACAAAGGAACACAGTTTCACCGTATAGTATCTGGATTCGTAGTCTAAGGAGGAGACG
TAATCCACGGTGATGGAAAAGGGAGCGAATCAATCTATGGTGGTACCTTTCTTGACGAAAATTTCAAAGCAAAGCATTCACATGCA
GGTGTTGTAGCGACGGGTAGTACAGGACCTGATTCTAATGGCTCACAGTTCTTTATCACCACTGTCAACGCTTCCTGGTTGGAAGG
GGAACATGTTGTGTTTGGTAAGGTGATACAAGGGATGGACTATGTGTTCGCCATTGAAGGTGGGGCTGGTACTTACAGTGGCAAAC
CAAGGAAGAAAGTTGTGATTGCTGATTCTGGAGAGATCCCTAAAGACAAATGGGATGAAGAATGATGACAAACACACAACCTCAAA
CTTGCTGATCTCGCTCTGTTCATGTGAGATCCTCTCTCTCTCTCTCTTTTTATTTATAGTTTTGGTAGATGTGATGATCTGAATTC
TGAACACTATGCCAATGTTGTCCACAAACGTTGCAATGAGCAATAACGCACGACCAGTAGTATGGTCTTGGGTTAAAGAATGTAGC
TATGCATCTTTGTAGCAGCACTAGAGATTCTATTGATGATTGGTAGTTTCTTTAATGCCAAATAAGCTCTCTTGGTTATGTTGATT
TTACCAAAATCCTTTACCACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAF81521 putative peptidyl-prolyl cis-trans isomerase [Brassica rapa] | 670 | 4e-068 |
| XP_002869115 hypothetical protein ARALYDRAFT_491161 [Arabidopsis lyrata subsp. lyrata] | 664 | 2e-067 |
| NP_195222 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] | 648 | 1e-065 |
| XP_002533862 peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis] | 623 | 1e-062 |
| XP_002277717 PREDICTED: hypothetical protein [Vitis vinifera] | 604 | 2e-060 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 450 | 6e-044 |
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 419 | 2e-040 |
| Q9SKQ0 Peptidyl-prolyl cis-trans isomerase CYP19-2 | 391 | 4e-037 |
| P52011 Peptidyl-prolyl cis-trans isomerase 3 | 390 | 5e-037 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 390 | 5e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8CF54 Peptidyl-prolyl cis-trans isomerase | 670 | 3e-068 |
| O49605 Peptidyl-prolyl cis-trans isomerase | 648 | 1e-065 |
| B9T6J3 Peptidyl-prolyl cis-trans isomerase | 623 | 8e-063 |
| C6TGD4 Peptidyl-prolyl cis-trans isomerase | 597 | 8e-060 |
| B9HR79 Predicted protein | 595 | 1e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34960.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 648 | 6e-068 |
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 450 | 5e-045 |
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 419 | 2e-041 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 400 | 3e-039 |
| AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase | 391 | 4e-038 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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