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Information for unigene UN49088
| FASTA Sequence |
| Unigene ID: UN49088 | Length: 653 |
SSR | | GATCGTCGACGTGCCTGTCTTCGGGAGGCTGACGTTACCCTTGGAGAAGCGCGGGGAGATTCCTATACCTAAGAAGCCTGATGTAG
ACATTGAGAAGATCAAGTTCCAGAAGTTTTCTCTGGAAGAGACTGTTGCGATACTCCACGTGAGGCTTGAGAACATGAATGATTTT
GACTTGGGGCTTAACGACTTGGACTGTGAGGTTTGGTTGAGTGATGTGAGCATTGGGAAAGCTGAGATAGCGGATTCTATTAAGCT
TGATAAGAACGGGAGCGGGTTGGTTAACGTGCCGATCACGTTTAGGCCCAAGGATTTTGGGTCTGCGCTTTGGGATATGATTCGTG
GTAAAGGGACGGGGTATACTATTAAATGGAATGTGGATGTTGATACGCCGTTTGGTGCTATAAAGCTTCCTATTGTTAAGGAAGGT
GGTGAGACTCGTTTGAAGAAGGAAGATAATGATGATGATGATGATGACGAATGAGGAGTAAGGGAAAGAGCTCAAGAGAATGAGTG
TGGTTTTAAGTAATGAATCTTCCATCTTTAAAAAATAATGTTTTTTTTAAGTTAAACTGGGGACTTGTGTTTGGTGTGTGTTGTTG
ATGACTGATGGATCAGACTTTTCAGTAGTGCTGTCTTTTGTTTGGACTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880080 predicted protein [Arabidopsis lyrata subsp. lyrata] | 780 | 4e-081 |
| NP_181934 Late embryogenesis abundant protein, group 2 [Arabidopsis thaliana] | 778 | 7e-081 |
| AAM64433 similar to late embryogenesis abundant proteins [Arabidopsis thaliana] | 776 | 1e-080 |
| ABK95225 unknown [Populus trichocarpa] | 660 | 3e-067 |
| XP_002310373 predicted protein [Populus trichocarpa] | 660 | 3e-067 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| O80576 At2g44060 | 778 | 5e-081 |
| Q8LCW6 Similar to late embryogenesis abundant proteins | 776 | 8e-081 |
| A9PFS2 Putative uncharacterized protein | 660 | 2e-067 |
| B9HGA5 Predicted protein | 660 | 2e-067 |
| B9T526 Late embryogenesis abundant protein Lea14-A, putative | 656 | 7e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44060.1 late embryogenesis abundant family protein / LEA family protein | 778 | 3e-083 |
| AT2G44060.2 late embryogenesis abundant family protein / LEA family protein | 778 | 3e-083 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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