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Information for unigene UN49163

FASTA Sequence
Unigene ID: UN49163Length: 1464 SSR 
CTTCCGTAGAGAGAGAGAAAGATAAAAGAGATTTCTCAAAGTCAGACTCTTTGGACCGCCATTGATGCACCTTTCTTCGCCGTGAT
ATGCTCTCACTTACTGACCAAAAGTCTAATCTTTAATATCTACTAAACTCTCTCTCTCTCTCTCCTTAAAGGGTTTCCCTGAGATT
CCACCGTTTATGGATCTGACCGGCGCCTTCGGAGCTAGATCCGCCGCCGTCGAGCCGTGCCGGGAACCACCGGGGCTCGAATCACT
TCATCTCGGCGGCGGCGACGGTGGTTTCACGGCGTTGCTCGAGCTTCCGCCTACACAAGCCGTGGAGCTTCTCCATTTCACCGATC
CGTCTCCGTCTCCTTCTCAGACGGCCGTCGCCGGAATCGGCTTAGACGTCTCTCCACCGCCGCCGCCGCCGCTTCTTCACTCTTAC
GGAGCATTGACTTTTCCTTCTAACTCACTCCTCCTCGAGAGAGCAGCTCGCTTCTCGGTGATGGCCAACGAGCAGCTGCAAAACGG
AAACGTCTCCGGCGAGACCACCACGACGAGCTCGGTGCCTTCTAACTCTAATTCTAATCTGGATAGAGTCAAGACGGAGCCTGGTG
AGACAGATTCGTCATCTCGGCGTTTGGAGAACGATCGATGTGGCAAGAGGAAAGAAGTCGACAAGAAGGTGAAAGGCTCAGCGAAG
AAGAAGAGCAAAAGCTCTGAAGAGAACGAGAAGCTGCCTTATGTTCACGTTAGAGCTCGCCGTGGTCAAGCAACAGATAGCCATAG
CTTAGCGGAACGAGCAAGAAGAGAGAAGATAAATGCACGAATGAAGCTGCTACAGGAACTGGTCCCAGGCTGTGATAAGATTCAAG
GTACTGCGTTGGTGCTGGATGAAATCATAAACCATGTTCAGTCTTTACAACGTCAAGTGGAGATGCTATCAATGAGACTTGCTGCA
GTAAACCCCAGAATCGACTTCAATCTCGACACCATATTGGCTTCAGAAAGCGGTTCTTTAATGGATGGGAGCTTCAACGGAACAGC
AATGCAGCTAGCCTGGCCTCATCAAGTCACTGAGGCTGAACAATCCTTTCATCACCGGCAACTGCAACTGCAACAACCACCACCAC
AACAACAATGGCCTTATGATGGCTTAAACCAGCCGACGGCTTGGGGAAGAGAAGAGGATCAAGGGCATGGCAATGAACACACCACT
TTGATGGCTGTTTCTGAAAATATGATGGTGGGTTCTGCTAGTTTGCACCCAAACCAGGTCAAAATGGAGATGTGAGTTTGTGGGAA
AGCATGCAGTAGGTTATGAATGTGTATATATAAGCTGTGTTTCTCACTCTCCACATATATATAAAAATTATAGAATATATATATAT
AAGAGTTAGGTTATCTGTTAAAGAAGCTGTCAGTTATTTGATTAAGAGAGGCAATACTGGTGTATGATTTATTTCTTATTTTTACC
AG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33814 unnamed protein product [Thellungiella halophila]10589e-113
NP_850745 transcription factor bHLH60 [Arabidopsis thaliana]9881e-104
AAM10949 putative bHLH transcription factor [Arabidopsis thaliana]9843e-104
XP_002879977 hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp. lyrata]8974e-094
NP_850368 transcription factor bHLH48 [Arabidopsis thaliana]8832e-092

Swiss-Prot top hits (Blast detail)Scoree value
Q8VZ02 Transcription factor bHLH488837e-094
Q3EAI1 Transcription factor bHLH605942e-060
Q9CAA9 Transcription factor bHLH493891e-036
Q9SRT2 Transcription factor bHLH623756e-035
Q8GY61 Transcription factor bHLH633748e-035

TrEMBL top hits (Blast detail)Scoree value
B9N6V6 Predicted protein6464e-065
A2Q3E9 Helix-loop-helix DNA-binding6357e-064
A1YSK0 BHLHogu5514e-054
C7SQI9 BHLH transcription factor PTF15229e-051
B9II37 Predicted protein4852e-046

Arabidopsis top hits (Blast detail)Scoree value
AT3G57800.2 basic helix-loop-helix (bHLH) family protein9931e-107
AT2G42300.1 basic helix-loop-helix (bHLH) family protein8836e-095
AT2G42300.2 basic helix-loop-helix (bHLH) family protein6112e-063
AT3G57800.1 basic helix-loop-helix (bHLH) family protein5825e-060
AT1G68920.3 basic helix-loop-helix (bHLH) family protein3909e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
213  50%
 
181  17%
 
202  33%

Unigene MembersMember information