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Information for unigene UN49173
| FASTA Sequence |
| Unigene ID: UN49173 | Length: 1186 |
SSR | | GGTCTCAATTGTAACAATTATTTGCAAAAAGTCTACAACCTCTATTTCTCAATCTTAGTGGAACTTATATAACAGTGATACTAAAA
TTTTCTGCAACCATTTTTAACCATGCTCTTAACGTCATTTAAAATCTGTCTCATTATTCATCATCATCATAGGTTATAAGCTTGAG
AGCTTCTCCATCATGCATCTTCGTAGTCATTCTAATATTCCGTACCCCGTCATGACTAATAGCCTTGTACAGTCGCGGATGTTCAG
CATCCACAAACTCACTTGGCGGCTCCAAATCTTTATCCATCGGTCCTAACAAAAAAGAAGCGATAGAAAACCTCTTCGTCGCTTCG
TTGCACTGCACTCTATGCTTCACGTTGCACAACCTCCCATTGCTCCATATCGTAACCATGTCCCCGAGGTTGATAGCCAAAGTGTT
CGGCAACGGGCTTATGGGAAAGAACGTTCCCGAAGAATGGTCCATAGCTTCGAGCCCACCGACGTTTTCGTCGTCTTGAAGAATCG
TCAAAGCGTGAATCGGTATGTAACTGGACACCTAGTTTCCCGACAGTTTCGGGTTGGAAATGATACTTATTGATCCGGAACTGGCT
CGGCCATCCTTCGAAGAAGTTGGTCTCGGCTAAGCCGTAGCTCTCTGCTAACCTCCTTGCTAAATCTTTTGCAAGTCCATCGATAG
CTTTCGCATATTTTACCATTATGTCCCTTTGATCCGCTGAAGCCTCGAGCTGGTCACAGAAGGTGTTGACTGCTTGAGGAGAAGCC
ATGTCGTAGAGACCCAACGCTTCGTAATAAGGATTGATTTCGTTTGGAGCCCAGTAACCACTCCCTAGCAACACGTCTGTGTTACG
CACTTTCACCTCGTGCGGACGTTCGAAGAGATCAATCACGGTCTTCTTCATGTCGGACATCAAAGAGAGTGAAACTCCATGGTTGA
TCGCTCTGAAACATCCCCATCTCTCGCTCGCTTCGCGGATTTTCTGGTTCAGGATCTTGTCTGAAACCTCCCCCAAGTCTATCGTT
GGGATAATAACAACTCCATTGGTTTTCGCCATTATCTTCAATAGGAGAGGTTTTACACAATCTTTTGTGTTACGTGAATCTCTCTC
GAGAGAGAGAGAAAGAAGACGAAGGAGAAAGGTAAAAGGAAGTCGAAGACTGCAGTAATCGAAGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172865 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 823 | 1e-085 |
| XP_002892789 hypothetical protein ARALYDRAFT_471571 [Arabidopsis lyrata subsp. lyrata] | 806 | 1e-083 |
| XP_002892788 hypothetical protein ARALYDRAFT_334706 [Arabidopsis lyrata subsp. lyrata] | 711 | 1e-072 |
| NP_172864 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 691 | 2e-070 |
| XP_002298993 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] | 544 | 3e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04707 Gibberellin 20 oxidase 1-A | 167 | 6e-011 |
| O04706 Gibberellin 20 oxidase 1-B | 166 | 8e-011 |
| O04705 Gibberellin 20 oxidase 1-D | 166 | 8e-011 |
| P40902 Sexual differentiation process protein isp7 | 150 | 6e-009 |
| P0C5H5 Gibberellin 20 oxidase 2 | 149 | 7e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XI75 F7A19.21 protein | 823 | 8e-086 |
| Q9XI76 Dioxygenase-like protein | 691 | 2e-070 |
| B9GJL0 2-oxoglutarate-dependent dioxygenase | 544 | 2e-053 |
| B9SRB9 Gibberellin 3-beta-dioxygenase, putative | 537 | 1e-052 |
| Q2Z1Y9 2-oxoacid-dependent dioxygenase | 521 | 8e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14130.1 2-oxoglutarate-dependent dioxygenase, putative | 823 | 4e-088 |
| AT1G14120.1 2-oxoglutarate-dependent dioxygenase, putative | 691 | 9e-073 |
| AT3G19010.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 198 | 1e-015 |
| AT3G19000.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 183 | 7e-014 |
| AT5G20400.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 178 | 3e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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