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Information for unigene UN49198

FASTA Sequence
Unigene ID: UN49198Length: 997 SSR 
GGAAACACGCACCACATTCTCTCTCTCTCTCTCACTTAGTTCACAAACAAAGAACAAAGAGAAACTCTTCAGACGCATTAGAGATC
AAAAGATGAACATAGCTCACACCATCTTCGGCGTTTTCGGAAACGCTACTGCTCTGTTCCTGTTCTTGGCTCCTTCGATAACATTC
AAGAGAATCATCAAGAACAAATCAACCGAACAGTTCTCTGGCATCCCTTACCCTATGACTCTCCTCAACTGTCTCCTCTCCACCTG
GTACGGACTTCCCTTTGTGTCAAAAGACAACACGCTTGTGAGCACAATCAACGGAACAGGAGCAGCGATAGAGACAATCTACGTCC
TGATCTTCCTTTTCTACGCACCAAGGAAAGAGAAAGCCAAGATCTTTGCTATCTTCACAGCCGTCTTGACCGTGTTCGCAACGGTG
GCTCTAGTCTCTCTCTTTGCTCTCCATGGTAACGGTAGAAAACTCTTCTGTGGTATCGCAGCTACTGTTTTCTCCATCATCATGTA
CGCTTCTCCCCTCTCAATCATGAGATTGGTGATAAAGACGAAGAGTGTAGAGTACATGCCATTCTTTTTGTCACTCTTTGTCTTCC
TCTGTGGAACTTCTTGGTTCATTTATGGACTCATCGGTCGTGACCCTTTTGTTGCAATCCCAAATGGGTTTGGATGTGCTTTAGGG
ACAGTGCAGTTGATTCTCTATTTCATCTACTGTGGAAACAAAGGCGACAAATCAACAGATGCTGAAAAGGATGAGAAGAAGAGTGT
GGAGATGAAAGATGAGGAGGAGAAGAAGCAAAATGTTGTTAATGGAAAGAAGCAAGATCAGCAAGTTTAGATCTTTTGAGAATGAT
CTGTTCCCGTTTTTAACTCTTTCTTCATTAGAGTTTTCTTTTACTTTTGTGTTTAGTTGTCATGTAAAAACAAAACTATGCTGAAA
AATGTATGATTCCTACTGATAAGTGAAACAAGTGATTGAGTTACAAATATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893163 nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata]11535e-124
NP_564140 Nodulin MtN3-like protein [Arabidopsis thaliana]11526e-124
XP_002526178 conserved hypothetical protein [Ricinus communis]9644e-102
XP_002307476 predicted protein [Populus trichocarpa]9286e-098
AAF87899 Unknown protein [Arabidopsis thaliana]9214e-097

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFH5 Protein RUPTURED POLLEN GRAIN 14329e-042
Q5EB14 RAG1-activating protein 1 homolog2071e-015
Q54JW5 RAG1-activating protein 1 homolog1981e-014
A8XI14 RAG1-activating protein 1 homolog1836e-013
O45102 RAG1-activating protein 1 homolog1773e-012

TrEMBL top hits (Blast detail)Scoree value
Q8L9J7 Putative uncharacterized protein11524e-124
B9SJK9 Putative uncharacterized protein9643e-102
B9H7N2 Predicted protein9284e-098
Q9LPL1 F24J8.9 protein9213e-097
C6TBS9 Putative uncharacterized protein9033e-095

Arabidopsis top hits (Blast detail)Scoree value
AT1G21460.1 nodulin MtN3 family protein11532e-126
AT4G10850.1 nodulin MtN3 family protein5072e-051
AT1G66770.1 nodulin MtN3 family protein4945e-050
AT5G53190.1 nodulin MtN3 family protein4901e-049
AT5G62850.1 AtVEX1 (VEGETATIVE CELL EXPRESSED1)4784e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information