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Information for unigene UN49236
| FASTA Sequence |
| Unigene ID: UN49236 | Length: 1474 |
SSR | | CCTCTCTTCTCTCTTAGCTCTTTCTTCATCAAGAAACCGACATCCTTGTCCCAAGATCCTATTCCAATCAAAAAATGGGAAGAGTT
CCGATTCTAATGCAACCCAGAAGCTAAATCTATCAAGCATACGTAAAACCGATGGACAGAGTACGAGGTTTATGCAAATGGGCTCT
CGAGAGATGAGATTTGGGAGAAAACTTTCAACTCAAGCCATGGATGATGGTGCAGGAACAGGAAACACGTCAGAAACGATCTCTCG
TAAGGTGTTTGCGACAACGCACTTGTTGGTGTCGCTTGGGATCATACTTGCGGCAGACCGGTTCTTGAAACAGGCTTTTGTAGCAG
CTTCCATCAAGTTCCCTAGCGCTCTGTTCGGGATGTTCTGTATTTTCTCTGTTCTCATGATATTAGACTCCGTTGTTCCCGCTGCT
GCGACCGGTATGATGAATTTCTTCGAGCCAGCGTTTCTGTTCATCCAGAGATGGCTTCCTTTGTTCTACGTCCCTTCTCTTGTTGT
TCTCCCTCTCTCCGTCAGAGATATTCCTGCTGCTTCAGGGGTTAAAATCTGCTACATTGTAGCTGGTGGATGGTTGGCGTCTCTTT
GTGTAGCAGGTTTCACAGCTATAGCAGTGAGAAAAATGGTGAAAACCGAGATGACGGAAGCTGAGCCTATGTCAAAACCTTCACCA
TTTTCAACACTTGAGCTATGGAGTTGGAGTGGGATCTTTGTTGTGTCCTTTGTTGGTGCTCTGTTTTACCCTACTTCGCTGGGGAC
AAGTGCAAGAACTTGTCTCCCTTTCCTTCTTTCTTCTACTGTTCTAGGTTACATTGTGGGATCAGGGTAATATTCGAATCCCACTA
TCAAGTCTCTCTCTCTCTCTCTCTCTCTCTTGATGTTATATTCTCATTGTCTTGTCTTTCTTTTCTTCAAGGTTGCCATCTTCTAT
CAAGAAAGTTTTCCATCCGATAATCTGCTGTGCGCTATCTTCAGTACTCGCTGCTTTAGCTTTTGGATATGCTTCAGGATCTGGAC
TTGATCCTGTTTTAGGTAAAGTCACACAAGCAATAGAGAAACCCTATAAAAAACCTAAATCAGAATGTTTAACTACTCTTTAAATG
GATGCAGGAAACTACCTAACCAAAGTAGCATCGGATCCTGGTGCTGGTGACATACTAATGGGTTTTCTTGGCTCTGTCATCCTCTC
TTTCGCTTTCTCCATGTTTAAACAAAGAAAGCTCGTGAAGAGGCATGCAGCTGAGATTTTCACATCTGTGATTGTTTCAACGGTAT
TCTCGCTCTACTCAACTGCTCTTGTTGGACGTTTGGTCGGTTTAGAACCATCTTTAACGGTGTCAATATTACCACGCTGCATCACG
GTTGCATTGGCCCTTAGCATTGTATCACTCTTTGAAGGAACCAATTCGTCTCTTACAGCGGCTGTAGTCGTTGTGACTGGTCTTAT
TGGAGCTAACTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564388 putative membrane protein [Arabidopsis thaliana] | 1144 | 1e-122 |
| AAM65181 unknown [Arabidopsis thaliana] | 1139 | 4e-122 |
| XP_002893698 hypothetical protein ARALYDRAFT_473391 [Arabidopsis lyrata subsp. lyrata] | 1041 | 8e-111 |
| XP_002519004 conserved hypothetical protein [Ricinus communis] | 909 | 2e-095 |
| CBI31242 unnamed protein product [Vitis vinifera] | 805 | 2e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P39590 Uncharacterized protein ywbG | 140 | 1e-007 |
| Q5HL71 Holin-like protein cidB | 130 | 2e-006 |
| Q8CR39 Holin-like protein cidB | 130 | 2e-006 |
| P42102 Uncharacterized protein yxaC | 123 | 1e-005 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FVQ4 At1g32080/F3C3_12 | 1144 | 7e-123 |
| Q8LAS5 Putative uncharacterized protein | 1139 | 2e-122 |
| B9RZ35 Putative uncharacterized protein | 909 | 1e-095 |
| B9GZT6 Predicted protein | 783 | 5e-081 |
| B6U217 LrgB-like family protein | 764 | 8e-079 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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