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Information for unigene UN49252
| FASTA Sequence |
| Unigene ID: UN49252 | Length: 825 |
SSR | | GGGTCGGAAGAAAGAGATAAAAAAGAGAGAGGGAGAGAGAGAGAGCGACAATGGCGTTGCACGTCATATCATCATCATCTTCAGCC
ACTTGTGTGACCTTGGCTTCCACCATCAGAGCCTTCGTCAGACCTTCTATCTCCCTCAGAACTACTCCATTTACTCGCTCTCCGTC
CAAGCTTAACCTCCTTCCTCCCTCCGTCTCTCCTTCATCATTTCCTCCGCTTCGTCTTTGTAGACGAGGCTTCCACGGTGGTTGTG
TCAAAGCGATGGCTTCTTCTGCTCCCGGATCGGTCAACAAGCCAGAGGAAGAGTGGCGTGCCATCCTGTCTCCTGAGCAATTCAGG
ATTCTAAGGGAGAAAGGCACTGAATATCCAGGAACAGGAGAATACAACAAACTATTCGAAGACGGCATATATTCCTGTGCAGGATG
TGGAACTCCTCTTTACAAATCTGCCACCAAGTTCGATTCCGGTTGTGGCTGGCCAGCCTTCTTTGACGGCATTCCCGGTGCTATAA
ACCGAACTCCTGATCCAGATGGGAGAAGAATCGAGATCACTTGTGCGGCTTGTGGAGGTCATCTCGGCCACGTTTTCAAAGGAGAA
GGTTTCCCTACACCTACCGATGAGCGACACTGTGTGAACAGTGTCTCTCTCAAGTTCGCACCAGGGAATTCAACCTTGTAATAATG
CACTTGTGTTGTGTAATGCATCTATCTATTTCTTGTGTCGTCCTGCTCTTTGTAACCGGTGTTTAGTCCCATTAATGTCATAATCA
TATATAAGATTTTACACAAGCTGGTGAATAAAGTAACTTCATTTCTTTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567639 peptide methionine sulfoxide reductase B2 [Arabidopsis thaliana] | 797 | 7e-083 |
| AAM62876 unknown [Arabidopsis thaliana] | 779 | 8e-081 |
| XP_002867820 methionine sulfoxide reductase domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 767 | 2e-079 |
| ABU49226 chloroplast methionine sulfoxide reductase B2 precursor [Nicotiana tabacum] | 705 | 3e-072 |
| XP_002518306 methionine sulfoxide reductase, putative [Ricinus communis] | 691 | 1e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9C5C8 Peptide methionine sulfoxide reductase B2, chloroplastic | 797 | 3e-084 |
| Q6AUK5 Peptide methionine sulfoxide reductase B3, chloroplastic | 641 | 4e-066 |
| Q10L32 Peptide methionine sulfoxide reductase B5 | 626 | 2e-064 |
| Q9M0Z6 Peptide methionine sulfoxide reductase B3 | 614 | 5e-063 |
| Q9ZS91 Peptide methionine sulfoxide reductase B5 | 600 | 2e-061 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A7U629 Chloroplast methionine sulfoxide reductase B2 | 705 | 2e-072 |
| B9RX37 Methionine sulfoxide reductase, putative | 691 | 9e-071 |
| B9GJ03 Methionine sulfoxide reductase type | 662 | 2e-067 |
| B7S5L0 Methionine-R-sulfoxide reductase B1 protein | 661 | 3e-067 |
| B7S5L1 Methionine-R-sulfoxide reductase B2 protein | 661 | 3e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G21860.1 MSRB2 (methionine sulfoxide reductase B 2); peptide-methionine-(S)-S-oxide reductase | 798 | 2e-085 |
| AT4G04800.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 615 | 4e-064 |
| AT4G04830.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 600 | 2e-062 |
| AT4G21850.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 573 | 3e-059 |
| AT4G04810.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein | 562 | 5e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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