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Information for unigene UN49289
| FASTA Sequence |
| Unigene ID: UN49289 | Length: 721 |
SSR | | TCATCATATTCATAAAGTTTATAGCTGAGTGAAACGAATCTCACAGATAAAAGGACAAACATAACATAAAAACTAAAAAAACAAAA
CTAATCTGAAGTGAGACTTTTGGATACAAGCATAAATGCCTTTTGTCTCACTTTTCCCAGAATAGATACCATAAAACAAAAGATTC
GAAACTTAAAGAGTAGCATAAGACAAACTCATCTCATTATTCGTCATCGCTGTCTTTGCTTTTCTTCTTCTTCTCCTTCTTTTTCT
TCTTGTCACTCTTCTCTGCTGATTCACCACCACCAGCTTCATCTGTCTCCTTGTCCTTCTTTTTCTTCTTCTTCTTCTCACTCTTC
TCTGCTGGTGATTCATCTTCACCATTAACCGCAGCAGCAGCTTCATCTGTCTCCTTGCTCTTCTTTTTCTTCTTCTTCTCTGACTT
CGGTGTTGCCAACTCTTCTTTATCCTCCTCCTTGTCCTCCTTCTTCTTCTTCTCCTTCTTCTCAGACTTCACCTTCTCTTCAACCT
CAACATCTTTTGTTTTGGCTTTCTTGGTGGACACAGCCGCAGGGCTGGCGCTGCTCTCATCATGCTTACGCTTGCGCACTTCTCCA
CTCTCAGCCTCAACCTTCTCAGGAGCGGCAGCAGCACCAGCAGCGATCATAGCATCACCTCCAGTAGGCAAAACAACATTCCTGCT
CCACTCAACAGGCGTTTTCTCATTCGGCTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191274 H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] | 445 | 3e-042 |
| XP_002878134 hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp. lyrata] | 426 | 5e-040 |
| AAK83589 AT3g57150/F24I3_230 [Arabidopsis thaliana] | 396 | 2e-036 |
| XP_648334 hypothetical protein [Entamoeba histolytica HM-1:IMSS] | 224 | 1e-016 |
| EFN86296 hypothetical protein EAI_03492 [Harpegnathos saltator] | 213 | 3e-015 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LD90 H/ACA ribonucleoprotein complex subunit 4 | 465 | 8e-046 |
| Q55FI4 Nucleolar protein 58 | 235 | 4e-019 |
| A5E4P1 Protein PXR1 | 216 | 6e-017 |
| Q54T81 Probable H/ACA ribonucleoprotein complex subunit 4 | 200 | 4e-015 |
| A6RIE1 Protein pxr1 | 192 | 3e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0SVF3 Putative uncharacterized protein At3g57150 (Fragment) | 445 | 2e-042 |
| B9H9F7 Predicted protein | 272 | 3e-022 |
| C4M402 Putative uncharacterized protein | 224 | 1e-016 |
| Q7R8E7 Ran-binding protein | 211 | 3e-015 |
| Q9LGZ9 Genomic DNA, chromosome 3, BAC clone:F1D9 | 203 | 3e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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