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Information for unigene UN49366
| FASTA Sequence |
| Unigene ID: UN49366 | Length: 811 |
SSR | | GACGACCAGCCGCGCTTGCTTGACACACAGACAGGAAAGCTCAACAAAAATGGTGTCGGGATCAGGCATATGCTCGAAGCGCGTGG
TCGTGGACGCGCGGCACCACATGCTGGGGCGACTGGCGTCGATCGTCGCCAAGGAGCTGCTGAACGGGCAGAAGGTCGTGATCGTG
CGGTGCGAGGAGATTTGCCTCTCAGGCGGACTCGTCCGCCAGAAAATGAAGTACATGAGGTTCCTCCGCAAGCGTATGAACACCAA
GCCTTCGCACGGGCCCATTCACTTCCGCGCTCCCTCCAAAATCTTCTGGCGCACTGTTCGCGGTATGATTCCACACAAAACGAAGC
GTGGAGCTGCGACACTTGCCCGCGTGAAGGTTTTCGAGGGTGTACCTCCACCATATGACAAGGTCAAGAGGATGGTTATCCCCGAT
ACCCTCAAGGTGTTGAGGCTTCAAGCTGGTCACAAGTACTGCTTGTTGGGTCGCCTTTCTTCTGAAGTCGGGTGGAACCACTATGA
CACCATCAAGGAGCTGGAGACGAAGAGGAAGGAGAGATCTCAAGTGGTTTACGAGAGAAAGAAACAACTTAACAAACTTAGAGCCA
AGGCTGAGAAGGTTGCCGAAGAGAAGCTCGGTGCACAGCTCGAAATTCTTTCACCAGTCAAGTACTGAGAGAAGATCATCATCATC
ATCATCACTAGTTGTGTTGTACTCTTCTCATGTTTTTGAACCGACCTATCAGACTTTATTACTTAGGGTGTTGTATGAGATTTTGT
CCTTATATTATCATTCTCGAGTTCCAATTTATTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865669 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 1022 | 5e-109 |
| XP_002883564 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 1015 | 3e-108 |
| NP_199687 60S ribosomal protein L13a-4 [Arabidopsis thaliana] | 1014 | 4e-108 |
| XP_002863167 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1013 | 6e-108 |
| NP_193053 60S ribosomal protein L13a-3 [Arabidopsis thaliana] | 1000 | 2e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FKC0 60S ribosomal protein L13a-4 | 1014 | 2e-109 |
| Q9SVR0 60S ribosomal protein L13a-3 | 1000 | 9e-108 |
| Q9LRX8 60S ribosomal protein L13a-2 | 999 | 1e-107 |
| Q9SFU1 60S ribosomal protein L13a-1 | 991 | 1e-106 |
| O49885 60S ribosomal protein L13a | 921 | 1e-098 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RWI8 60S ribosomal protein L13a, putative | 980 | 3e-104 |
| B9S526 60S ribosomal protein L13a, putative | 977 | 6e-104 |
| C6SYZ8 Putative uncharacterized protein | 971 | 3e-103 |
| C6TFI1 Putative uncharacterized protein | 969 | 5e-103 |
| B6VC51 60S ribosomal protein L13A | 968 | 7e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G48760.1 60S ribosomal protein L13A (RPL13aD) | 1015 | 1e-110 |
| AT5G48760.2 60S ribosomal protein L13A (RPL13aD) | 1015 | 1e-110 |
| AT4G13170.1 60S ribosomal protein L13A (RPL13aC) | 1001 | 6e-109 |
| AT3G24830.1 60S ribosomal protein L13A (RPL13aB) | 1000 | 8e-109 |
| AT3G07110.1 60S ribosomal protein L13A (RPL13aA) | 992 | 7e-108 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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