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Information for unigene UN49383

FASTA Sequence
Unigene ID: UN49383Length: 1061 SSR 
GGGCCTCTCGCTCCGACGGCGAATCCGTCTTCTCCCGCCGATGTCAGCATACAATAACAGAGTAAATCCGTGATTCTCCAAATCCA
GGAGGCAAAAGAAGAAGAAGAAGAAGATGAGTTTCGTATTCCGAGGAGGTAGAGGAGATTTAGAGAGCGGATTCTCAGGATTCATA
TCCGATAGACGAGCTATGCGTGTTCATGGAGCTCGACCTGTGAACTCTAACTCCCTCGCTTTTCTTGTCACTGTTCTTTTGCTGTT
CATGATTCTCAACTCGCATCAGATGCCTCCTAATTTCCTGCTCTGGCTTGTGCTTGGGGTGTTTTTGATGGCGACGACTCTTCGGA
TGTATGCGACTTGCCAGCAACTTCAAGCTCAGGCACAGGCTCATGTTGCCGCAGCTAGTGGTCTCTTCAGCCACACTGAGCTCAGG
CTGCATGTGCCTCCCTCCATTGCTCTTGCTACCAGAGGGCGTCTTCAAGGACTTAGGCTTCAGCTGGCTCTTCTTGATCGGGAGTT
TGATGACTTAGATTATGAAACTCTAAGAGCACTTGATTCTGATAATGTCCCCACAAATTCTATGAGCGAGGAAGAGATAAATGCAC
TTCCTGTACACAAGTACAAGGTGTTGGATCCTGAAAATGGTTCCTCTTTGACAAAGCAGGCATCAACCTCATACTCAGCGGAGAAG
AAGCAAGATTCTGTCAGTGCGAGTAAAATAGGGACGGAAGACGAGCTCACTTGTAGTGTTTGCCTCGAACAAGTTACCGTTGGGGA
GGTTGTTCGCACCCTGCCGTGCCTGCATCAGTTTCATGCAGTCTGTATCGATCCATGGCTTAGACAGCAAGGAACATGTCCTGTCT
GTAAATTCAAGGCGCACTCAGGATGGCAAGAACAAGACGACGGGACAGATGATGATGATGATGATGAAGCCTCCCTCATGGTTTGA
GAGTTCGGTTTTTGGACACTTGTTATGTTATTAGTGTGTGTATTGAAAAATGGAGACCCCAAAACAAATCATGTAATGGTTGATGA
GTTTTTAACTGTTTGATTAGATTCAAAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878037 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]12872e-139
NP_191112 E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana]12477e-135
CBI31650 unnamed protein product [Vitis vinifera]11024e-118
ADN34069 protein binding protein [Cucumis melo subsp. melo]11008e-118
XP_002283148 PREDICTED: hypothetical protein [Vitis vinifera]10926e-117

Swiss-Prot top hits (Blast detail)Scoree value
Q9M2S6 E3 ubiquitin-protein ligase SDIR112473e-136
Q3U2C5 E3 ubiquitin-protein ligase RNF1491641e-010
Q8NC42 E3 ubiquitin-protein ligase RNF1491631e-010
Q07G42 E3 ubiquitin-protein ligase RNF121622e-010
Q641J8 E3 ubiquitin-protein ligase RNF12-A1613e-010

TrEMBL top hits (Blast detail)Scoree value
B9HTG7 Predicted protein10826e-116
B9T008 Protein binding protein, putative10729e-115
C6TKE4 Putative uncharacterized protein10648e-114
B9HPE3 Predicted protein10621e-113
C6TGC2 Putative uncharacterized protein10531e-112

Arabidopsis top hits (Blast detail)Scoree value
AT3G55530.1 SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1); protein binding / ubiquitin-protein ligase/ zinc ion binding12473e-137
AT5G24870.1 zinc finger (C3HC4-type RING finger) family protein1702e-012
AT5G24870.2 zinc finger (C3HC4-type RING finger) family protein1702e-012
AT3G58720.1 zinc finger (C3HC4-type RING finger) family protein1675e-012
AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein1641e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information