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Information for unigene UN49410
| FASTA Sequence |
| Unigene ID: UN49410 | Length: 1058 |
SSR | | AGTAGAATTCTTGATCTTAGTAACACGAAACATAAGAACACTTTCCTTTAAAAAAAACAAAGTTCTCCTGTCTTTATTCATTATTA
TTTTATGATTTATATGTGTATATAGGAAACAAAAGAAAAGGAATCATCGATTCCTTAACTTGTGGAAATGGAAAATGAGATAATGT
TCCTACAGCAAGAAGGATCACTTTCTTCTTATTTGCCCAGACAAATTATTCAGACACACACACACAAGTATGGCTCGAAGCTTCGG
CTGATAGGAGAAACCATTGACAGTGAGACCTCCATCAACACAAATAGTCTGACCAGTAATATATGAAGCTGCAGGCAGACACAGAA
AAGCCACAAGTGATGCAACCTCTTTTGGCTCTCCAGCGCGAGCAAGTGGAGTTCTACTAAACAAACTCTTCTTGTAACAAACGTCT
CCGAGAACAGGTGCAGTCATATCAGTGAGGATAAAATTAGGAGCAACAGAGTTGGTTCTTATGCCATCAGTTGCCCACTCACACGC
CAAACTTCTTGATAGCTGATTCATAGCTCCTTTCGATAAACCATAAAGGGATCCGCATTCCATTGATACCACCCCTCCAACAGAAG
AATTCATAACAATGCTTCCATATCCAGAAGCCTTTAAAAGAGGATGTGAAAGCTGGCTAAGATGATAAGCTGATTCCAAGTTTGTT
GAAATATGGAACGAGAAATCATCTGCCACATATTCTGTTGTTGGTTTAAGGCGAATTCCCCCAACGTTATTCACAAGAATGCTCAG
CTTGCCATCGAACATCTTTGAGACGGTTTGCATCAGTGTTTCTCTCTCGGGACGAGAGGATACATCACATATTGAACCACTAACTT
GGAACCCTTTCTTTTCCCAGTCGCTTAAACTTTTATTAAGCAGTGTTTCGGATATGTCACATACATGGATTATAGCTCCAAAACTA
GCTAACTCTTCTACTATGGCATACCCGATTCCGCAGGCTCCACCAGTTACAAGAGCAGTCATGCCTTGAAGACTCCATCTTTTATC
CATTTCTTTGTTTTGCATGTGAGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180625 tropine dehydrogenase [Arabidopsis thaliana] | 1089 | 1e-116 |
| XP_002881123 hypothetical protein ARALYDRAFT_902059 [Arabidopsis lyrata subsp. lyrata] | 1086 | 3e-116 |
| ABW81122 putative tropinone reductase-18 [Boechera divaricarpa] | 1084 | 5e-116 |
| ABW81048 tropinoe-reductase-like33_2 [Arabidopsis lyrata subsp. lyrata] | 1078 | 3e-115 |
| XP_002879209 hypothetical protein ARALYDRAFT_481846 [Arabidopsis lyrata subsp. lyrata] | 1077 | 3e-115 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ASX2 Tropinone reductase homolog At1g07440 | 934 | 6e-100 |
| P50165 Tropinone reductase homolog | 754 | 4e-079 |
| P50162 Tropinone reductase 1 | 699 | 1e-072 |
| P50163 Tropinone reductase 2 | 671 | 2e-069 |
| P50164 Tropinone reductase 2 | 666 | 7e-069 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O49332 Putative tropinone reductase | 1089 | 1e-116 |
| B2BXS5 Putative tropinone reductase-18 | 1084 | 4e-116 |
| B2BXL1 Tropinoe-reductase-like33_2 | 1078 | 2e-115 |
| B2BXL3 Tropinone-reductase-like35 | 1076 | 3e-115 |
| B2BXS8 Short chain dehydrogenase | 1075 | 4e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G30670.1 tropinone reductase, putative / tropine dehydrogenase, putative | 1089 | 5e-119 |
| AT2G29310.1 tropinone reductase, putative / tropine dehydrogenase, putative | 1065 | 3e-116 |
| AT2G29300.1 tropinone reductase, putative / tropine dehydrogenase, putative | 1058 | 2e-115 |
| AT2G29340.2 short-chain dehydrogenase/reductase (SDR) family protein | 1058 | 2e-115 |
| AT2G29340.1 short-chain dehydrogenase/reductase (SDR) family protein | 1057 | 3e-115 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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