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Information for unigene UN49413

FASTA Sequence
Unigene ID: UN49413Length: 797 SSR 
TGAACAGCAATAATAGTAATTCATATTTCAGGTAATGCCGTATACAATCAGTGCATATAATAGAAAAAAATTAAACGAACAAAAAC
AATGAACACGATAGATTACACGATCACAAACTCTTGTTTTGAGTAAACCACACGCTTCGAATAAGAAAATCTAACCGATATATATA
TATCTCTCTTTTAAGTGTAGAAACTCAAACTCTTCCCGCATGAGGCCTTTCACCGGCGACTGTTTCTCCAACTCCGACGTGAATGG
CTCCGATGCACAATAACTGAGTAGCACTCACAATGATTGTCATAACTTCAAGAGTTCTTAAATTGGCCTCGGTCCAGCCTATGTTG
ATCTCCTTACATGCCAATCCCATGGCGAGGAGAGTGAGAGACCAGGAGATGAGAGAGGAAGCCGCTGCGGAGTGGAGATTCGGGGA
GTCCCACTCAAGAACGTTCATGATTCCGGCGAGTGAAGTCGTCATTCCGACGACGCCGGCGATCAGCGAGAATATTACGAAAAAAC
CAGTCGCCATGTTCCCCACCGGGAAGTAAATAGGGAAGATCTTCGCCGGAAGAGAAAGCACCGACGCAGACTCGCGAGCTCTCTCG
ATGCCGTGATTAACAGCCCAGGAAGCGATGATGGTGACGACAAAATAGAGACCAAGATTCAGCAGCAGAAGCATGAAAGCTGCCGA
CTTTGATCCTCCTGAAGCCATTATTAATTCTTCCGACAAGAAATTAAAAGCCTTGTAAGAGAACCTGACAAGATCCTTGTCTATGT
TTGTTTCTCTGTCTTGGGGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197398 AWPM-19-like protein [Arabidopsis thaliana]7922e-082
XP_002873921 hypothetical protein ARALYDRAFT_488781 [Arabidopsis lyrata subsp. lyrata]7852e-081
XP_002312732 predicted protein [Populus trichocarpa]6175e-062
XP_002516802 conserved hypothetical protein [Ricinus communis]5961e-059
XP_002277418 PREDICTED: hypothetical protein [Vitis vinifera]5834e-058

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LG79 Plasma membrane associated protein-like7922e-082
B9HMA9 Predicted protein6173e-062
B9RST3 Putative uncharacterized protein5969e-060
A2Y4G2 Putative uncharacterized protein4614e-044
Q6ATY8 Putative uncharacterized protein4614e-044

Arabidopsis top hits (Blast detail)Scoree value
AT5G18970.1 AWPM-19-like membrane family protein7938e-085
AT1G29520.1 AWPM-19-like membrane family protein3521e-033
AT5G46530.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like membrane family protein (TAIR:AT1G29520.1); Has 98 Blast hits to 98 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3492e-033
AT1G04560.1 AWPM-19-like membrane family protein2329e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information