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Information for unigene UN49437

FASTA Sequence
Unigene ID: UN49437Length: 803 SSR 
GGGTCGTCTTCTTGCAGAGATTAAAAAAAAATTAAAAGAGCCTCGAAAAAATTCACAGACTTGTCTCCCCCTCTCTCTTTCAGATT
TTAGTAGCTTCTGAAAAATTTCACTAAGAAAAAAAATGAGCAAGTTCTGGACTTTCCTCACTGCTCTCCACTCAGGCGCTGGTCCA
CTGGTGATGTTGGTGTATCCATTGTACGCATCGGTGGTGGCAATGGAGAGCACAACGAAAGTAGACGACGAGCAGTGGCTTGCGTA
CTGGATCATTTACTCCTTTCTCACCCTCACGGAGCTGATTCTGCAATCGCTTCTTGAGTGGATCCCGATTTGGTATTCTGTGAAAC
TGGTGTTCGTAGCTTGGTTGGTCCTGCCTCAGTTCCATGGCGCAGCCTTCATTTACAACCGTGTGGTGAGAGAACAGTTCAAGAAA
CACGGCGTCTTCGGCTCCTCCTCCTCCTCCTCTCACACCAAACACTCCAAGCACTCCTCCAAACCCAACATCATACACTCCATTTT
CCACCGGGAGGGACACGAGGCTCACTCTCACTGACTCCAAGGCTGAGGAGAAGCTCGAATAGCATTGTAATGGGAGTTGGTGGTGG
CCCCTTCTCGTCTTCAAGTCTAATCTTACTTTTGCTTTAGTCTTTAATTTAAGTCTTTAATTTAATAATTTGAGAAATGTGATAAT
GACTGAGGAGGTGTGTGATCGTTTTAAATTAGAAATGGCTTCTTGTTATTGTTGTATTGCTTAGCTTCCACGACGCGTATTTTCCA
TTTGGAAACACAAGTGTTAACGCTATTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34072 unnamed protein product [Thellungiella halophila]6363e-064
ACJ09230 HVA22d [Arabidopsis thaliana]5682e-056
NP_567713 HVA22-like protein d [Arabidopsis thaliana]5476e-054
ACJ09256 HVA22d [Arabidopsis thaliana]5432e-053
XP_002869697 hypothetical protein ARALYDRAFT_914090 [Arabidopsis lyrata subsp. lyrata]5422e-053

Swiss-Prot top hits (Blast detail)Scoree value
Q9S760 HVA22-like protein d5473e-055
Q9FED2 HVA22-like protein e4783e-047
Q07764 Protein HVA224041e-038
Q9S7V4 HVA22-like protein a2857e-025
Q682H0 HVA22-like protein f2751e-023

TrEMBL top hits (Blast detail)Scoree value
B6VAJ7 HVA22d5682e-056
B6VAJ6 HVA22d5474e-054
B6VAM3 HVA22d5431e-053
B6VAL7 HVA22d5403e-053
Q0IGM2 At5g507204784e-046

Arabidopsis top hits (Blast detail)Scoree value
AT4G24960.1 ATHVA22D5822e-060
AT5G50720.1 ATHVA22E4783e-048
AT4G24960.2 ATHVA22D4326e-043
AT1G74520.1 ATHVA22A2856e-026
AT2G42820.1 HVA22F (HVA22-LIKE PROTEIN F)2759e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  60%
 
82  40%

Unigene MembersMember information