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Information for unigene UN49486
| FASTA Sequence |
| Unigene ID: UN49486 | Length: 1289 |
SSR | | GTGACGACAACGAAGCAAAAAAAGAAAGTAGTTTTTGTTCCCCGTTGAAGCTCAACTAGTTTTCTCGATCTCTCTAGATCTAGCTT
ATCGGCATTGCAGTTGATACTTTACTCCATAGTTGTAAAGCTATGGTGACGATCCGTAGCGCTTCAGTCTTTATTCTAGTTCTGCT
CGCTGTCTCATGCCTGGCGTTGGTTGCAAACGGGGAAGACAAAACGATTAAAGTGAAGAAGGTGAAGGGAAAGAAGGTGTGCACGC
AGGGATGGGAATGCGTCTGGTGGTCTCAGTACTGCTGTAACGAGACGATCTCTGATTACTTCCAGGTGTATCAGTTTGAGCAGCTC
TTCGCCAAAAGAAACACTCCAATTGCTCACGCTGTTGGTTTCTGGGACTACCAGTCTTTCATCACCGCCGCTGCTCTCTATGAGCC
TCTTGGGTTCGGTACCACTGGTGGAAAGCTCATGGGACAGAAAGAAATGGCTGCCTTCCTCGGCCATGTCGCCAGCAAAACGTCCT
GTGGCTATGGAGTTGCAACAGGAGGGCCTTTAGCTTGGGGTCTGTGCTATAACAGGGAGATGAGTCCAATGCAATCTTACTGTGAC
GAGACCTGGAAGTACAAGTACCCTTGCAGCCCTGGAGCTGAATACTACGGACGTGGTGCTTTACCCATTTACTGGAACTTCAACTA
CGGTGCAGCAGGGGAAGCACTAAAAGCTGATCTCTTGAACCACCCTGAGTACATCGAGCAGAACGCCACGCTTGCATTCCAAGCAG
CGATCTGGAGATGGATGGCACCGATCAAGAAAGCTCAGCCGTCAGCTCACGATATCTTCGTTGGGAACTGGAAACCGACGAAGAAC
GATACTCTGTCCAAACGTGGACCGACTTTTGGTACCACCATGAACGTCTTGTATGGAGAGTACACGTGCGGTCAAGGTGACATTGA
GCCGATGAACAACATTGTCTCTCACTATTTGTACTTCCTTGATCTCTTGGGTATTGGAAGAGAAGACGCGGGGCCTAACGAGGAGC
TCAGCTGCGCTGAGCAGAAACCATTTAACCCTTTTACTGCACCTTCCTCCTCCTCCTCGTAAGTCTCTCCGCATTGCCTCCTCCTG
GTAAGTCTCTCCGCATTGCTCATTGTTCTCAAGTCTCTTTTGCTTTTAACTCGACAAGTGTTATGTAATAAGTGAAATTGCTTGTG
TGTGTGTGTGGCTTCTTTTTGTCTAGGGCTTGGTCCCTGTAGAACAACTTATATTTTCCTGTATGTAATACCTTATTCAATTATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABV89660 chitinase [Brassica rapa] | 1709 | 2e-188 |
| NP_172076 chitinase-like protein 1 [Arabidopsis thaliana] | 1663 | 5e-183 |
| XP_002892310 pom-pom1 [Arabidopsis lyrata subsp. lyrata] | 1662 | 7e-183 |
| BAH30273 hypothetical protein [Arabidopsis thaliana] | 1657 | 3e-182 |
| BAJ33659 unnamed protein product [Thellungiella halophila] | 1563 | 2e-171 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9MA41 Chitinase-like protein 1 | 1663 | 2e-184 |
| Q9LSP9 Chitinase-like protein 2 | 1213 | 3e-132 |
| Q7DNA1 Chitinase 2 | 481 | 3e-047 |
| P06215 Endochitinase | 481 | 3e-047 |
| P36361 Endochitinase CH5B | 480 | 3e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXW1 Chitinase | 1709 | 2e-188 |
| A8IXW2 Chitinase | 1341 | 8e-146 |
| B9RPJ5 Chitinase, putative | 1335 | 4e-145 |
| Q7X7Q1 Class VII chitinase | 1332 | 9e-145 |
| A5B1C7 Putative uncharacterized protein | 1306 | 9e-142 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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