 |
Information for unigene UN49491
| FASTA Sequence |
| Unigene ID: UN49491 | Length: 888 |
SSR | | GGCTCGCCGCGTTTGTTTCTAGCGTCGTCGTTTCAGCTTCTCTCTCTCAGGTTGGAGATAGAAAGAGTGCAAAAAAAAATCATGTC
GGCCCTTGTGGCGTTATGCAGAGCTCGAGCTTCTTCTTCTTCTTCTGTGTTTAATAGCCTTGTTCGTCCAGCATTTCGCAGCTTCT
CCACAGGTTTTGGCGATGTGCAGAACAAAACACTGGTGGCGGAAATGGAAGAAAAGATGCTCCACATGGACATCAACTCAATGATA
GGAAGTTCCATGCCCCTAGGAATGATGCGCATAGGAACAATCATCCACAACATCGAGATGAACCCTGGTCAAGGCGCCAAGCTAGT
ACGAGCTGCGGGAACAAACGCCAAGATCCTCAAGGAGCCTGCTTCTGGGAGGTGCTTGATCAAGCTTCCTTCAGGTGACACCAGGT
GGATCAACGCCAGGTGCCGTGCTACCATTGGTACAGTGTCGAACCCGTCTCATGGAGTGAAGAAGCTGTATAAAGCAGGACAGAGT
AGGTGGCTGGGGATAAGACCGAAAGTGAGAGGTGTGGCGATGAATCCGTGTGATCATCCACATGGTGGTGGTGAAGGGAGGAGCAA
AAGTAGTGGAAGCAGAGGAAGGACATCGGTTAGCCCTTGGGGGAAGCCGTGCAAAGGTGGTTACAAGTCTGCTAGTGTCAAGAAGA
AGAAGAAGAGATTGGCTGCTAGAGAAGCCAAGATGTGATCTTGATAGAACAAGTTACAATAATGTCTTCAAATGCTTCTTTTTTTT
TTTGAGAGAGTTGGTTCTGAATGTTGTTACGTGTTTTCTTTTTCTTTTTTTCTTGGAACCGAAATCAAACGTTTTGATCGTCATAA
ACGTTTTTAATAAACGCGTTTTTCAGTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566007 ribosomal protein L2-like protein [Arabidopsis thaliana] | 1029 | 1e-109 |
| XP_002880081 ribosomal protein L2 family protein [Arabidopsis lyrata subsp. lyrata] | 1029 | 1e-109 |
| AAM64400 unknown [Arabidopsis thaliana] | 1021 | 8e-109 |
| CAA57902 ribosomal protein L2 [Arabidopsis thaliana] | 847 | 1e-088 |
| AAK95391 ribosomal protein L2 [Gossypium arboreum] | 644 | 4e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C8K6 60S ribosomal protein L2, mitochondrial | 507 | 1e-050 |
| Q2F969 60S ribosomal protein L2, mitochondrial | 507 | 1e-050 |
| P92812 60S ribosomal protein L2, mitochondrial | 507 | 1e-050 |
| P26859 60S ribosomal protein L2, mitochondrial | 467 | 6e-046 |
| O21247 60S ribosomal protein L2, mitochondrial | 391 | 4e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZU4 Expressed protein | 1029 | 7e-110 |
| Q8LCY4 Putative uncharacterized protein | 1021 | 6e-109 |
| Q39213 Ribosomal protein L2 | 847 | 8e-089 |
| Q8VZZ6 Ribosomal protein L2 (Fragment) | 644 | 3e-065 |
| B9IJ49 Predicted protein | 622 | 1e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44065.1 ribosomal protein L2 family protein | 1030 | 3e-112 |
| AT2G44065.2 ribosomal protein L2 family protein | 1030 | 3e-112 |
| ATCG00830.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 321 | 5e-030 |
| ATCG01310.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 321 | 5e-030 |
| AT3G51190.1 structural constituent of ribosome | 217 | 6e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
