RadishBase

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Information for unigene UN49505

FASTA Sequence

Unigene ID: UN49505	Length: 823	SSR
TTTTTCCGAGCAACTAAAATGGTGTTTGCGACCACCACCAACATCCTCCCCCTTCGCTCTTCAGTCCTCGTCAACCCTAGATTCCA CCATCCTCTTAATCGTCGTAATCCGCCTCTCCGTCTCTCCTTTCCCTACAAACCCTCCCTCAGAAACCCTAGAACCATCGTCTCCG CCGCCGCCGCCGCCTCCACATCTCCAACACTCTTCGCTAAACCCTCTCCTCGATTTCCCTTCTCCGACTCAACCAAATCAATCACG ACCCTCGCGATTCTCGCCGGAATCTTAACCAAAGCCCTTGTCCAAAAGCTCTCCACCGCTGTCGTGACCGTATCCCCACAGATTCA AGCCTCTGTCCGAGTCTCGGGTCCTCTGTTCTTTGCGGCGATTCGCGATCGTCCTGCTGGTTATCTCAACACTCCGTTGACGGTTG TTGCGGCTGGTTTGTCCAAGTGGCTAGATATCTACAGTGGTGTGTTGATGGTTAGGGTTTTACTGAGTTGGTTCCCCAACATTCCT TGGGACCGTCAGCCTTTGTCTGCCATTAGGGATCTTTGTGATCCTTATCTCAATCTCTTCAGGAACATCATCCCTCCCGTCTTTGA CACGCTTGACGTCAGCCCTCTCCTTGCTTTTGCTGTTTTGGGAACTTTGGGTTCCATTCTCAACAATAGCAGATGATTACTACTCT GCTTTGCAGGAGCTTATGGATCTTTGGGTGTTTTATATATTTTCTCTAGTTAATGTATTGGACTCAAACGCGTCGGTATCAAAATA TCTTTTGTTCTGTGTTTCTGGCACTGAATGAGTTTGGTTTCAATGTGAT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002867475 YGGT family protein [Arabidopsis lyrata subsp. lyrata]	819	2e-085
NP_194528 YGGT family protein [Arabidopsis thaliana]	810	2e-084
AAM64721 unknown [Arabidopsis thaliana]	798	5e-083
AAM66973 unknown [Arabidopsis thaliana]	640	1e-064
NP_566307 YGGT family protein [Arabidopsis thaliana]	637	2e-064

Swiss-Prot top hits (Blast detail)	Score	e value
O78424 Uncharacterized protein ycf19	176	3e-012
P51353 Uncharacterized protein ycf19	161	2e-010
Q1XDD4 Uncharacterized protein ycf19	161	2e-010
Q9TM45 Uncharacterized protein ycf19	143	2e-008
P28255 Uncharacterized protein ycf19	131	5e-007

TrEMBL top hits (Blast detail)	Score	e value
Q9SUE0 Putative uncharacterized protein AT4g27990	810	1e-084
Q8LBK0 Putative uncharacterized protein	798	4e-083
Q8L939 Putative uncharacterized protein	640	7e-065
Q9SRS3 At3g07430	637	2e-064
B9SMM7 Putative uncharacterized protein	559	2e-055

Arabidopsis top hits (Blast detail)	Score	e value
AT4G27990.1 YGGT family protein	810	9e-087
AT3G07430.1 emb1990 (embryo defective 1990)	639	6e-067
AT1G62760.1 invertase/pectin methylesterase inhibitor family protein	146	9e-010

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


7	2			100%

Unigene Members	Member information