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Information for unigene UN49516

FASTA Sequence
Unigene ID: UN49516Length: 897 SSR 
GGGCACCCGGAAAGAGAAGCATAAAATTGGTGGTTGTTGCCGACGACGCGTCTATTTGGGTCCTCTCCGTCTTTTGATCTTCAATC
TCATTTCCTCCATCCACGAGCTCTCTCTCTCTCTCTCTCTCTCGAGCTCAATCATGGCTACCACCGCTGCAAACAAGACCATTAAC
GCCAAATTGGTGTTACTTGGAGATGTTGGCGCTGGGAAATCCAGTCTTGTCTTACGCTTTGTTAAAGATCAGTTTGTTGAGTTCCA
GGAATCAACCATCGGTGCAGCTTTTTTCTCACAAACACTAGCTGTCAACGACGCCACTGTCAAGTTTGAGATATGGGATACAGCGG
GTCAGGAACGTTACCATAGTTTGGCTCCTATGTACTACAGGGGTGCTGCTGCTGCTATCATTGTCTTTGACGTTACAAACCAAGCC
TCGTTTGAGAGAGCAAAGAAATGGGTTCAGGAACTTCAGGCACAAGGTAACGCTAATATGGTGATGGCCCTTGCTGGAAACAAATC
TGATTTATTAGATGCAAGGAAGGTTTCCGCAGAGGAGGCACAAACATATGCTCAGGAGAACGGTCTTTTCTTCATGGAAACTTCGG
CAAAAACCGCAGCTAATGTCAAGGAGATATTCTATGAAATTGCAAGAAGGTTACCGAGAGTACAACCAACAGAAAACCCAACAGGA
ATGGTTCTACCAGATAGGGCCATGGATAGGGCAGTGAGTTCATCTTGTTGTACTTAGTTATATGTAATGGAATACACTTCCCTTAA
AGGGGACCTCCTGGTCAGTCAACATTGAGTTATGGACTTCTGTGTTTTGCATATCTTTGGTTTGTTTTGCTTGTGTGGGCATTTAT
TTTACCAATTAAAAAGGGTTGTAAATGAAGATATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867930 hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp. lyrata]9699e-103
NP_193699 Ras-related small GTP-binding family protein [Arabidopsis thaliana]9618e-102
NP_199326 Ras-related protein RHA1 [Arabidopsis thaliana]8953e-094
CAA50609 ras-related GTP-binding protein [Nicotiana tabacum]8668e-091
ABK92976 unknown [Populus trichocarpa]8641e-090

Swiss-Prot top hits (Blast detail)Scoree value
P31582 Ras-related protein RHA18952e-095
P31583 Ras-related protein RHN17974e-084
P29687 Ras-related protein Rab57786e-082
P51148 Ras-related protein Rab-5C6102e-062
Q5R7L7 Ras-related protein Rab-5C6102e-062

TrEMBL top hits (Blast detail)Scoree value
Q9SN68 AT4g19640/F24J7_1909615e-102
Q40570 Ras-related GTP-binding protein8665e-091
A9P9C3 Putative uncharacterized protein8649e-091
B9NA46 Predicted protein8631e-090
B9ICG5 Predicted protein8541e-089

Arabidopsis top hits (Blast detail)Scoree value
AT4G19640.1 ARA7; GTP binding9622e-104
AT5G45130.1 RHA1 (RAB HOMOLOG 1); GTP binding8961e-096
AT3G54840.1 ARA6; GTP binding / GTPase5285e-054
AT1G09630.1 ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding4022e-039
AT5G10260.1 AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding4003e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information