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Information for unigene UN49545
| FASTA Sequence |
| Unigene ID: UN49545 | Length: 1553 |
SSR | | AGAGCATTAGCCTGAGAGAGAGAGAGAGAGGTTTGCTCAAAGACAAGAGACCAAAATGGCATTGAAGCTAAACTCTTTGGCATGTC
AGCCATACAAACTCGCTTCCTCGACTCGTCCGCCAATCTCTACTTTCAGATCTCCCCAGTTCCTCTGCCACGCTTCTTCTTCACCC
GCTCTCAGCTCCAAGGAGGTCGAGAGTTTGAAGAAGCCATTCACGCCACCAAAGGAAGTGCACGTTCAAGTCTTGCACTCCATGCC
ACCCCAAAAGATCGAGATCTTCAAATCCATGGAAGACTGGGCCGAGCAGAACCTCCTGACCCATCTCAAGGACGTGGAGAAGTCAT
GGCAGCCCCAGGATTTCTTACCCGACCCTGCATCCGACGGGTTCGAAGATCAGGTGAAGGAGCTAAGAGAGAGGGCAAGAGAGCTC
CCCGATGATTACTTTGTTGTTTTGGTGGGAGACATGATCACAGAAGAAGCGCTTCCCACCTACCAAACTATGCTGAACACTTTGGA
TGGAGTTAGGGATGAGACTGGTGCTAGTCCCACTTCATGGGCTGTTTGGACAAGAGCTTGGACTGCTGAAGAGAACCGGCATGGTG
ATCTTCTCAATAAGTATCTTTACTTGTCTGGTCGTGTTGACATGAGGCAGATTGAGAAGACCATTCAGTACTTGATTGGTTCCGGA
ATGGATCCACGCACAGAGAACAACCCTTACCTTGGCTTCATCTACACTTCATTCCAAGAGAGAGCCACCTTCGTCTCTCACGGGAA
CACAGCACGCCAAGCCAAAGAGCATGGGGACCTCAAGCTAGCTCAGATATGTGGGACAATAGCCGCAGACGAGAAGCGTCACGAAA
CAGCTTACACCAAGATAGTTGAAAAGCTCCTTGAGATTGATCCTGATGGTACCGTGGTGGCTTTTGCAGACATGATGAGAAAGAAA
ATCTCGATGCCTGCTCACTTGATGTACGATGGGCGTGATGACAAACTCTTTGACAACTTCTCTTCCGTGGCTCAGAGGCTCGGTGT
TTACACTGCCAAAGACTATGCGGACATTCTTGAGTTTTTGGTCGGTAGGTGGAAGATAGAGAACTTGACAGGGCTCTCGGGTGAAG
GAAACAAAGCGCAAGAGTATTTATGTGGGTTGACTCCGAGAATCAGGAGATTGGATGAGAGAGCTCAAGCAAGAGCAAAGAAAGGT
CCCAAGATTCCTTTCAGCTGGATACATGACAGAGAAGTGCAGCTCTGAACAAAGAATAATAAACCCATTTTCTCTCTCTCCGTTCC
TCATTGGATCTGTCTGCTCTTGGTATTGGTGTAGATTACTATGGTTTCCTGATGATGTCCGTTGTGGTCTAGATACAAAGTTGAGA
AGCAGTGTCTTAGTAACTTTGTTTTTCTTCTTTTTCTTCTTTTTCCAGTCACTTCACTATGTTTTATGTTTGGTCTTTTAGTAAAC
TTGTGGTAGTTAAAACTTAAAACAGTTGAGCGTTTGGTCTGTACTCAGTTTTCACTGTTGAGTTTTTGTTTTAGTTGAAGTTAGTT
TTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAA52786 Stearoyl-acyl carrier protein desaturase [Brassica napus] | 2011 | 3e-223 |
| P29108 RecName: Full=Acyl-[acyl-carrier-protein] desaturase, chloroplastic; AltName: Full=Stearoyl-ACP desaturase; Flags: Precursor | 2007 | 9e-223 |
| AAT65205 stearoyl-ACP-desaturase [Brassica napus] | 1995 | 2e-221 |
| AAD40245 plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase [Brassica juncea] | 1994 | 3e-221 |
| Q01771 RecName: Full=Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic; AltName: Full=Stearoyl-ACP desaturase; Flags: Precursor | 1992 | 5e-221 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29108 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 2007 | 4e-224 |
| Q01771 Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic | 1992 | 2e-222 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1759 | 2e-195 |
| Q42807 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1705 | 4e-189 |
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1694 | 7e-188 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q39355 Acyl-[acyl-carrier-protein] desaturase | 2011 | 2e-223 |
| Q6DUV7 Acyl-[acyl-carrier-protein] desaturase | 1995 | 1e-221 |
| Q9XQR7 Acyl-[acyl-carrier-protein] desaturase | 1994 | 2e-221 |
| O22832 Acyl-[acyl-carrier-protein] desaturase | 1949 | 3e-216 |
| Q94AE9 Acyl-[acyl-carrier-protein] desaturase | 1945 | 9e-216 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 1950 | 1e-218 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 1945 | 5e-218 |
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1539 | 6e-171 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1499 | 3e-166 |
| AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 1364 | 1e-150 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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