Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN49580

FASTA Sequence
Unigene ID: UN49580Length: 730 SSR 
GGGGGGCAGAAGAAGAAGAAGAAGAAGAAAACCATGGGAAGATCTCCTTGCTGCGAGAAATAACACATGAACAAAGGTGCTTGGAC
TAAAGAAGAAGACGAGAGACTCGTCTCTTACATCAAATCACACGGCGAAGGCTGTTGGCGATCTCTCCCTAGAGCTGCCGGTCTCC
TCCGTTGCGGCAAGAGCTGCCGTCTCCGGTGGATTAACTATCTCCGGCCTGATCTCAAAAGAGGAAACTTTACCCACGACGAAGAT
GAAGTTATCATCAAGCTTCACAGCCTCCTTGGAAACAAGTGGTCTTTAATTGCGGCGAGGTTACCTGGAAGAACAGATAACGAGAT
CAAGAATTATTGGAACACACATATAAAGAGGAAACTTTTGAGCAAAGGGATTGATCCCAACACTCACAGATCAATCAACGCCGCGA
AAGATCATGATCTGAAGAAAACAGGGGACCAAGTTGTAAAAGATGTGTCTTTTGGGTCTCTGTTTCATAAAACAGAAAAGTCTGAG
GAGCAAAAGCAAAATAAAAACCAAAAGCAAAATCTAATCAATGGGTTCGTTTGCAAAGAAGAGAGGGTTGAGCATCACCCAGTTGT
TGTTGTTGTCCAAGAAAAGATTTGCCCAGAATTGAATCTCGAGCTTAGATCAGTCCACCGTGGCAAACAGAGTTATGATGATCAGA
CAGAGAGAGATCTGCTACACTGCATCCCATCTTACGTCGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886068 hypothetical protein ARALYDRAFT_899987 [Arabidopsis lyrata subsp. lyrata]8495e-089
NP_179263 myb domain protein 7 [Arabidopsis thaliana]8432e-088
BAJ34375 unnamed protein product [Thellungiella halophila]6668e-068
CAA64614 transcription factor [Solanum lycopersicum]6651e-067
AAS19480 MYB6 [Tradescantia fluminensis]6651e-067

Swiss-Prot top hits (Blast detail)Scoree value
O49608 Transcription factor MYB326791e-070
Q9SZP1 Transcription repressor MYB46782e-070
P81393 Myb-related protein 3086655e-069
P81395 Myb-related protein 3306639e-069
Q38851 Transcription repressor MYB66593e-068

TrEMBL top hits (Blast detail)Scoree value
Q42379 DNA-binding protein8432e-088
C5X6V2 Putative uncharacterized protein Sb02g0311906657e-068
Q09GS5 Transcription factor MYBZ26657e-068
Q43525 Transcription factor6657e-068
Q6SL45 MYB66657e-068

Arabidopsis top hits (Blast detail)Scoree value
AT2G16720.1 MYB7 (MYB DOMAIN PROTEIN 7); DNA binding / transcription factor8431e-090
AT4G34990.1 AtMYB32 (myb domain protein 32); DNA binding / transcription factor6791e-071
AT4G38620.1 MYB4; DNA binding / transcription factor6781e-071
AT4G09460.1 ATMYB6; DNA binding / transcription factor6592e-069
AT1G22640.1 MYB3 (MYB DOMAIN PROTEIN 3); DNA binding / transcription factor6503e-068

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information