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Information for unigene UN49633
| FASTA Sequence |
| Unigene ID: UN49633 | Length: 845 |
SSR | | GGGTTTCTAGCTTCGTCGTTTCAGCTTCTCTTTCAGGTTGGAGATAAGAGTGCAAAGAAATCATGTCGGCCCTTGTGGCATTATGC
AGAGCTCGAGCTTCTTCTTCTTCTTCTTCTGTGTTCAATAGCCTTGTTCGTCCAACATTTCGCAGCTTCTCCACAGGTTTTGGTGA
TGTGCAGAACAAAACACTGGTGGCAGAAATGGAAGAAAAGATGCTCCACATGGACATCAACTCGATGATAGGAAGTTCCATGCCCC
TAGGAATGATGCGCATAGGAACAATCATCCACAACATCGAGATGAACCCTGGTCAAGGCGCCAAGCTAGTACGAGCCGCGGGAACA
AACGCCAAGATCCTCAAGGAGCCTGCTTCGGGGAGGTGCTTGATCAAGCTTCCTTCAGGTGACACCAGGTGGATCAACGCCAGGTG
CCGTGCTACCATCGGTACTGTCTCAAACCCGTCCCATGGAGTGAAAAAGCTGTATAAAGCAGGACAGAGCAGGTGGCTGGGGATAA
TACCCAAAGTGAGAGGTGTGGCGATGAATCCGTGTGATCGTCCACATGGTGGTGGTGAAGGGAAAAGCAAAAGTAGTGGAAGCAGA
GGTAGGACGTCTGTTAGCCCTTGGGGGAAGCCGTGCAAAGGTGGTTACAAGTTTGCTAGTGTCAAGAAGAAGAAGAAGCGATTGGC
TGCTAGAGAAGCCAAGATGTGATCTTGATAGAACAAGTTACAATAATGTCTTCAAATGCATTTTTTTTTTTTTGAGAGTTGGTTCT
GAATGTTGTTACGTGTTTTTTTTTTTTCCTTGGAACTGAAATCAAACGTTTTGATCGTCATAAACGTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566007 ribosomal protein L2-like protein [Arabidopsis thaliana] | 989 | 4e-105 |
| XP_002880081 ribosomal protein L2 family protein [Arabidopsis lyrata subsp. lyrata] | 989 | 4e-105 |
| AAM64400 unknown [Arabidopsis thaliana] | 981 | 3e-104 |
| CAA57902 ribosomal protein L2 [Arabidopsis thaliana] | 828 | 2e-086 |
| AAK95391 ribosomal protein L2 [Gossypium arboreum] | 622 | 1e-062 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C8K6 60S ribosomal protein L2, mitochondrial | 487 | 3e-048 |
| Q2F969 60S ribosomal protein L2, mitochondrial | 487 | 3e-048 |
| P92812 60S ribosomal protein L2, mitochondrial | 487 | 3e-048 |
| P26859 60S ribosomal protein L2, mitochondrial | 447 | 1e-043 |
| O21247 60S ribosomal protein L2, mitochondrial | 375 | 3e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZU4 Expressed protein | 989 | 3e-105 |
| Q8LCY4 Putative uncharacterized protein | 981 | 2e-104 |
| Q39213 Ribosomal protein L2 | 828 | 1e-086 |
| Q8VZZ6 Ribosomal protein L2 (Fragment) | 622 | 1e-062 |
| B9T6J5 50S ribosomal protein L2, putative | 601 | 3e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44065.1 ribosomal protein L2 family protein | 995 | 3e-108 |
| AT2G44065.2 ribosomal protein L2 family protein | 995 | 3e-108 |
| ATCG00830.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 302 | 7e-028 |
| ATCG01310.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 302 | 7e-028 |
| AT3G51190.1 structural constituent of ribosome | 206 | 1e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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