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Information for unigene UN49635
| FASTA Sequence |
| Unigene ID: UN49635 | Length: 816 |
SSR | | GGGACCTAGAAGTTGATTTGGATTCTTATCCACAATTCAATCTCTTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTCTCGTCATCACAGAGACTTTAATGGCGGCTTCGTTCTCACTTACGAGCTTCATCTCCTTCATCTCACCATTCAAATCCCACAC
CAAACCAACCCCGCCTCCAAATGTCACACTCCCCACTCCAACACTCTCCCACAGACGGTAACGATCTCGCCGTCGAATCAATGGCC
ATGGACGCGGAGGAACCTTCTTCCAACGCTTCTCTTTCCTCCGAGCTCGCCTCAGTGATATGCCCGTCGCTCGCTTACCCGAACAC
GCTCCTCTTCAGCAGCTCCGGGTACAACGTGCAGGTGTTCGTGGAGGATAACGAGTCGGAGGAGAGGCTGGTGAATCGGTTTAGAA
GGGAGGTGATGAGTACGGGGGTTATACAGGAATGCAAGAGGAGGAGGTACTTTGAGAACAAGCAGGACGAGAAGAAGCGGAGGACT
CGTGATGCTGCTAAGCGTAACAAGAAAAGGCGTCCGTTTGCAAAGTTTACTCAAGAGACCAGAGAAGAAGCAGCAGCGGCAGCAAC
CAAGAGTAAGAAGAAGGATGAACAAGAAGATAACTGGGACTGGGAGATGCCTGGTGGCGATGTACCTTCTTGAACACCGTTTCAGT
ACATAGATCTCCCCTTCCTTTTCTGTCTATTTTGATTGCTCGGTGACATTGTATGTTCAAATTGCGTGTAACTTGCCTCTCTGGTA
ATGAGTTCTTGTCAATGTTAAAGACATCTTTTTATTATGACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875359 hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata] | 625 | 6e-063 |
| NP_566809 ribosomal protein S21 family protein [Arabidopsis thaliana] | 605 | 1e-060 |
| AAK64005 AT3g27160/MYF5_3 [Arabidopsis thaliana] | 601 | 4e-060 |
| 3BBN Chain U, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome. | 418 | 6e-039 |
| CAN82190 hypothetical protein VITISV_031115 [Vitis vinifera] | 404 | 2e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P82024 30S ribosomal protein S21, chloroplastic (Fragment) | 133 | 3e-007 |
| B2UNE2 30S ribosomal protein S21 | 127 | 1e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LI88 Genomic DNA, chromosome 3, P1 clone:MYF5 | 605 | 8e-061 |
| Q94BT7 AT3g27160/MYF5_3 | 601 | 2e-060 |
| Q8VWX5 Ribosome-like protein (Fragment) | 418 | 4e-039 |
| A5AI30 Putative uncharacterized protein | 404 | 2e-037 |
| B9RBJ4 Structural constituent of ribosome, putative | 393 | 3e-036 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G27160.1 GHS1 (GLUCOSE HYPERSENSITIVE 1); structural constituent of ribosome | 621 | 7e-065 |
| AT5G63300.1 structural constituent of ribosome | 252 | 4e-022 |
| AT5G63300.2 structural constituent of ribosome | 209 | 4e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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