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Information for unigene UN49649

FASTA Sequence
Unigene ID: UN49649Length: 1120 SSR 
CGAAAACCTTGTTCTATTCTCTAAACTCTGTAGAAATGATATAATGTAATAACAAGAATCACAATAATTAACCGTAACCACCTCTC
TCTCACACACACACACAAAACTACCGAGTCTTGCTCGTCTTTCATTCAAGATGAAGCCGCTTCTGCGTCTTTTTCTTCTGCGTTTC
CTTGTGCTGTGGCTTCTTCTCCTTCAGCTTCACTGGGCTTTTCTGGTCCAGGTCCAGCTGATACTTTCACCATTGAAGGACGCAAA
AGCCTTCCCCCTAGCAAGAAACCCTTCCTGTATTCTTCAAGTACTATACCTTCTTCGTATTCTGCAAAATCCTCCCTCATTATTGC
CTCATGAAGCATTGGATCAAACTGCTTGCCAACTGTCTCCACAGTGACCACACCAAGCGACCCCAGAATTTCCACAAACTGTTTGT
ATATGCTCTGATAGCTGTTAGTGACTTTCTCTTCTCCCTCAGTCTCCACTTTAATCTGAGACTTAGCTCTCTCGAAATTATCCAAA
ACCGCCAAAAGATTCTCCACAACCTCTCCCTGAGCATTGGAAACAAGGTTCAGCCTTTCCCTCTCTGTCCTCTTCCTGAAGTTGTC
GAAATCCGCACTGATTCTTATCAGCCGATCCCTCTCCACAGTTAGCTCATTGGTTAAAGATGCTACTTTATCCTCGAGGTGAAACT
TTTCGTCTTCAATGGACTTCAATGATGCTTCTATCTCAGCAATCTTCTCCTCGTTGTTCTCTGCTAAAGCTTCTTTATACGAATTC
AGCAATGCCACGGTAACCGCCGCTTCTTCCTCAGAGCTAGTGTCTTCACTCTCAACACCAACAGCACCATCAGTATCCTGGACTTG
GGGTTCGTTGGATTCGACCTCAGTCTCCGTACGAAGTTTAGTGAACGGAGAGGATAGCCATCGGAGACAGAGCGGAGAGAAGCAGC
TCGGCGAGAGAGTGAGACGCTGCTGATGTTTCTTCCTCCGGCGAAGGAGACGCAAAAGGGCTTAAAGGGTACGGAGGGTGCATGAA
GAAGAGACGGTGTGAGCTGTAAAGACGGCGTTTTGAGTAGACCGGCCATCGGAGAGTTGGGTGAAAAGAGTTGGCGGCGAGGGATC
CC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850840 molecular chaperone GrpE [Arabidopsis thaliana]10748e-115
NP_568356 molecular chaperone GrpE [Arabidopsis thaliana]10523e-112
XP_002873846 EMB1241 [Arabidopsis lyrata subsp. lyrata]10471e-111
XP_002319738 predicted protein [Populus trichocarpa]8256e-086
XP_002530954 Protein grpE, putative [Ricinus communis]8005e-083

Swiss-Prot top hits (Blast detail)Scoree value
Q8DJB3 Protein grpE3826e-036
A2BNE2 Protein grpE3772e-035
Q3ANN0 Protein grpE3772e-035
A2C5L7 Protein grpE3754e-035
Q114R5 Protein grpE3745e-035

TrEMBL top hits (Blast detail)Scoree value
Q9XQC7 GrpE protein homolog10746e-115
Q94K56 GrpE protein homolog10522e-112
B9I664 GrpE protein homolog8254e-086
B9SY85 GrpE protein homolog8003e-083
B9F116 GrpE protein homolog7207e-074

Arabidopsis top hits (Blast detail)Scoree value
AT5G17710.2 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization10743e-117
AT5G17710.1 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization10521e-114
AT1G36390.1 co-chaperone grpE family protein4938e-050
AT1G36390.2 co-chaperone grpE family protein4938e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
61  50%

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