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Information for unigene UN49651
| FASTA Sequence |
| Unigene ID: UN49651 | Length: 1113 |
SSR | | CCGGCAATAAAAACAATATTATATAACTCGATCTTACAGGACAAAGGCATAGTGCAACCAATGTTTACGCTAATCTTTATTTGTGA
ATTCTTCTGAAACAAGAAAAAAAAGACAAACCGTATCAAAAAACCTGAGCCAGTTCCAGTAGAAACGAGATAGCTAAAGGCAAATC
ACGTTCATATCTTAGAAGCCTAGTAGTTACCACTAACTACCAAGAAACGTGAACTTACTTCAAGTATTGGCATCAGCAACAACAAC
AACAAAAAAAGAAAAGTAATTAAGCAACTAGCTCGGCCTCTGATTGCTCTGTATCAGCCGCTGCCTTGGAAGGCTTATGGACAATC
TTCGGTTCTGGTTTCTCAATTCCTTGTATATCGGTTATTCTCAACTTCGTTAATTCCTGTCGATGTCCTGTGGTTCTTCTGTAATT
CTTTCTTCGTTTCTTTTTGAAAATGAGCACTTTTTCGTCCAGTGCATGCTCTTCCACAACCGCATGAACAGTGGCATCAGGCAAGA
TAGGCCTCCCAATAATCGTCTGGCTTGCTGAGCCCATTAGAAGCACCTTGGTCAGTACCAACTTATCATTGATGTCACAGAACTTC
AACTTCTCAGTGAAAATGGAGTCCCCGTTGCTTACTTTGAACTGATGCGAACCAATCTGAACAACGGCAAACACAGGCCCGTAGGG
TTTGAACAATCTCTCCGAAGGTTTGAGAGGACCCATCACCTTGTACCCTATCTCCGCCGCGGCCCCTACTTTCTCCGCCGGTGAAT
ACTCCCTTTCTACTACTTCCATCTCCCCCGAATCCTCGTAGTCCTCCTCATCATCACCTTCGCTGCTTTCGTCAGTGTCGCTTGTT
TTCGAAGAGAAATGTCGACCTTGGGAGCGATAATACGATGGGAGATCTCTGGTGAGAGATCGATTCTGAGATGGGATCCAATGAGT
AATGCTGCTTGTCCCGGGGAGCTCTGATCGATGAAATGAAGAGATCGAGCGCGTTTGGTTGACCGAGAGAGCCGTCGTGGCGCGGC
GGCTTAACCCGCGGAGGTATCGAAGGCTCGCCATCGGAGAGCAAAGAGTATAACTTAGGGTTTGCCAAGACTCGAGAGAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567861 50S ribosomal protein L21 [Arabidopsis thaliana] | 1018 | 3e-108 |
| CAA18200 putative protein [Arabidopsis thaliana] | 945 | 8e-100 |
| XP_002867320 hypothetical protein ARALYDRAFT_328625 [Arabidopsis lyrata subsp. lyrata] | 829 | 2e-086 |
| XP_002263309 PREDICTED: hypothetical protein [Vitis vinifera] | 663 | 4e-067 |
| XP_002519068 50S ribosomal protein L21, mitochondrial precursor, putative [Ricinus communis] | 663 | 4e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L9A0 50S ribosomal protein L21, mitochondrial | 1018 | 1e-109 |
| P24613 50S ribosomal protein L21, chloroplastic | 315 | 4e-028 |
| P51412 50S ribosomal protein L21, chloroplastic | 279 | 6e-024 |
| Q54IF0 Probable 39S ribosomal protein L21, mitochondrial | 242 | 1e-019 |
| B6IR01 50S ribosomal protein L21 | 234 | 9e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WRT4 50S ribosomal protein L21 | 1018 | 2e-108 |
| B9RZ99 50S ribosomal protein L21 | 663 | 3e-067 |
| C5YVG2 50S ribosomal protein L21 | 614 | 1e-061 |
| B6TJJ8 50S ribosomal protein L21 | 613 | 2e-061 |
| B4FI28 50S ribosomal protein L21 | 610 | 4e-061 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G30930.1 NFD1 (NUCLEAR FUSION DEFECTIVE 1); RNA binding / structural constituent of ribosome | 1023 | 3e-111 |
| AT1G35680.1 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | 279 | 5e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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