Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN49653

FASTA Sequence
Unigene ID: UN49653Length: 1304 SSR 
CTCCAAGCAAAAACTTTAATGTTCAACACCACAAATGTAGTCCTCCCTACTAAAACACAACGGCAAAAAAAGAAAACCTAAAAGAA
AGAAAAGGAGAATCGTTCGCTGGGCACACGATATCGTCAAGGTAAATGGCACTTCAGTTGTTAGAACGCAGCAAAAGAAGAAGAAG
GAACACCTCTCCCATCTGGCATCTCGAATGGAATCTTTCTTTTTTTTCCTAATGAAAAGGTTTAGTGAAAGTGGGATTCAAGAAGA
ATGTTGGTGGCTGCATTGACATCATTTCTGGCGTGTACAAGGGCCTGTCTAGCTGCGTTCTGGTCAAATCCCATGGACACCAGAGT
AGCTATTGCTTCCTCAGATGGCTCTATACTTGACGGCACCGGAGCTTGATATGATCTCACTGCTTGGCGACCTAAGCTGGGTGATG
TCCTTGTTGGTGCTTGAGAATGGCTGCTCGAGGATGGCAAAGACATTCGGGAAAAGAAGGAAGCAATGAACTCTGGAATCTTTGCC
TTGCGGATACCAAAGATGTTCAACCGATACAATGAACCAGCAATTATGCCGCAAATTCCAGGTAACATGGATCTTTTCCAAGATGA
TAGTAAAAGCTGGACACCAGCAAGATATATGAATGATTTATCAGAGAAGTGAGCGCCAAACACATTGAACCTCTTTGTAACCGGAA
TGTCCAAGTAGAATGGTACAAAGGAAGCAAATATGAGGGCGTATGGTCCAGATGTCAGTAGGTTTGCTGTAGGGTCTTTGAACAGT
GATAACACAATGGTCTGTAGAATTAGTGATACAAACCCAGAGAACAAGATGAAAACCGAGTGCTTATTGGAACCAATCTGTCTCTC
AAAGACACGGAAGTAGTAAAGCAGATAGACGCCAAAGAACAATTCAGGGGTGGAGGAGAAGGCGAAATTCGATTTGATTAGCTTCC
ATATCTTGAACTTCTCGAAAATATCCTGGTAAGACAAACCGAGCTTGGAAGAGCCTCCTCCTCCTCCTCCACGGATCCCGAAGAAG
ACAGTGAAGAGGGCGCTGGTGATGACGAAGGCTCTCGTGACCGGAGCATTATTGAAACCAGAGGGACCTCCGTTCATCGTGTAATC
GGATGAACAGAAAAAAGTCAACAATCGGCGGAGGAAAGCTCGTCGATGATTGAATCTCTGGAACTGGCGATGGATGGATCGAGGGG
TTTTTGTTTCTCTCTCTCGAGTCGTGTCTTTCTTCGAAAGGAAGGATCTTTCAGTGATCTCTCGATGTCAGACTACCATTACTCTG
ATAATTAAGAGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850346 Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]12281e-132
XP_002881758 ubiquitin-associated /TS-N domain-containing protein [Arabidopsis lyrata subsp. lyrata]12102e-130
NP_191233 Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]11474e-123
XP_002876380 ubiquitin-associated /TS-N domain-containing protein [Arabidopsis lyrata subsp. lyrata]11359e-122
XP_002307981 predicted protein [Populus trichocarpa]10183e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q5ZJQ8 Ubiquitin-associated domain-containing protein 22099e-016
Q9UTK7 UBA domain-containing protein 141462e-008

TrEMBL top hits (Blast detail)Scoree value
Q8RXQ2 Putative uncharacterized protein At2g4117012281e-132
Q9LET3 At3g5674011705e-126
B9H936 Predicted protein10182e-108
B7FJZ2 Putative uncharacterized protein9994e-106
C6T9M1 Putative uncharacterized protein9861e-104

Arabidopsis top hits (Blast detail)Scoree value
AT2G41160.1 ubiquitin-associated (UBA)/TS-N domain-containing protein12529e-138
AT3G56740.1 ubiquitin-associated (UBA)/TS-N domain-containing protein11712e-128

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  75%
 
211  25%

Unigene MembersMember information