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Information for unigene UN49676

FASTA Sequence
Unigene ID: UN49676Length: 1362 SSR 
TCTCTGATCTCTTCTCCTCCGTCGAAGTTTGAATCCTCTCTCGTTCTCACCTGAGCTTCCTTTAGCTTCGATTCTCTCGCATTTGC
TTATTAGGTTATATGCACGAATGAGATCGTTGTAGATCGTGACTGACGCGAGAGAGAGAGAGAGAGAGAGAGAGATAAAAAAAAAA
TTAGGAGAGCGAAGATGAGCGAGGGCCAGAAGTTCCAGCTAGGAACAATCGGCGCTTTGAGTCTGTCCGTTGTGTCGTCTGTGTCG
ATCGTGATCTGTAACAAGGCGCTTATTAGCACCCTTGGCTTCACCTTCGCGACTACGTTGACAAGTTGGCATCTATTGGTCACGTT
TTGTTCCCTTCATGTGGCACTATGGATGAAGATGTTTGAACACAAGCCTTTTGATCCACGAGCTGTGATGGGATTTGGCATACTGA
ATGGGATATCTATTGGACTATTGAACCTCAGCCTGGGCTTTAATTCCGTTGGTTTTTACCAGATGACAAAACTAGCAATCATCCCC
TGTACTGTTCTCTTGGAGACCCTCTTCTTCAGGAAAAAGTTCAGTCGAAAAATTCAGTTTTCATTAACCATCCTTCTCCTTGGTGT
TGGAATTGCAACCGTCACAGATCTTCAGCTTAATATGCTGGGTTCTGTCTTGTCGCTGCTGGCTGTTATCACAACTTGCGTTGCTC
AAATTATGACAAATACCATCCAGAAGAAGTTCAAAGTTTCATCCACGCAGCTTCTTTATCAGTCTTGCCCTTATCAAGCAATTACA
CTTTTCGTCACTGGCCCATTTTTAGATGGACTACTAACCAACCAGAACGTGTTTGCTTTCAAGTACACTTCTCAAGTTGTGTTCTT
CATCGTCCTGTCTTGCATGATATCAGTCTCTGTAAACTTCAGCACTTTTCTGGTCATTGGGAAAACGTCTCCGGTCACGTATCAGG
TACTCGGACATCTGAAAACATGCCTGGTTCTAGCATTTGGCTATGTGTTGCTGAAGGACCCATTCAACTGGCGCAACATTCTTGGT
ATTATGGTGGCTGTGATTGGAATGGTTGTTTATTCCTATTTCTGCTCGGTTGAAACTCAGCAGAAGGCAAGTGAAACATCAACCCA
GTTGCCTCAGATGAAAGAGAGTGAGAAGGATCCGCTAATAGCAGCTGAAAATGGAAGCGGAGTGTTATCAGATGGTGGTGGTGTTG
GTGTGGGTGTGCAAAAGACGACAGCCCCTGTATGGAACTCGAATAGAGATTTTCAAGCCTAAAAAACTGAACATTGCTATTTTTTT
TCTTATATATATAAATATCAAACTCTCTTTTGTATCAGATTTGTCAGAAAAGAAAAACTTTTTTTATTCCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172172 nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]17399e-192
XP_002892363 hypothetical protein ARALYDRAFT_470711 [Arabidopsis lyrata subsp. lyrata]17343e-191
NP_001184926 nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]16941e-186
NP_001154542 Nucleotide/sugar transporter family protein [Arabidopsis thaliana]16152e-177
XP_002881111 hypothetical protein ARALYDRAFT_320800 [Arabidopsis lyrata subsp. lyrata]16035e-176

Swiss-Prot top hits (Blast detail)Scoree value
Q8RXL8 Uncharacterized membrane protein At1g0689017483e-194
Q1JQ66 Solute carrier family 35 member E34356e-042
A4IFK2 Solute carrier family 35 member E34186e-040
Q7Z769 Solute carrier family 35 member E34061e-038
Q6PGC7 Solute carrier family 35 member E33943e-037

TrEMBL top hits (Blast detail)Scoree value
Q8GUJ1 At2g3046016151e-177
B9RX14 UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative15972e-175
B9INM8 Predicted protein15452e-169
A9PAL1 Putative uncharacterized protein15433e-169
A9PIW7 Putative uncharacterized protein15433e-169

Arabidopsis top hits (Blast detail)Scoree value
AT1G06890.1 transporter-related17449e-195
AT1G06890.2 transporter-related17449e-195
AT2G30460.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: transporter-related (TAIR:AT1G06890.2); Has 782 Blast hits to 581 proteins in 90 species: Archae - 0; Bacteria - 6; Metazoa - 140; Fungi - 34; Plants - 501; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).16212e-180
AT2G30460.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: transporter-related (TAIR:AT1G06890.2).16212e-180
AT2G28315.1 LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: transporter-related (TAIR:AT1G06890.2); Has 1852 Blast hits to 1847 proteins in 207 species: Archae - 0; Bacteria - 58; Metazoa - 582; Fungi - 250; Plants - 685; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink).11552e-126

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
202  67%
 
71  33%

Unigene MembersMember information