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Information for unigene UN49702

FASTA Sequence
Unigene ID: UN49702Length: 923 SSR 
GGAACTAGATTCACAACCTCCACACACTTCCAAAACATAGAGAGAGAGAGAGAGCGAGAGAGAGCGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAAACAAGCACCCTATGGTACCTGTTCTTGAATAAAATTAGGGCATATTTCCTTTCTCAAGACGACCCT
AAAGAACTATAAAAAGACCAGATATCAGAATTTGTGTGTGTCTGTATATAGATAAACATTTACATCCCCAAACATGATCAAGACGT
TGGAACGGTACCAGAAATGCAGTTACGGTTATATTGAAGTCAACAACAAACCTGCCAAACAACTTGAGAACAGCTACAGAGAGTAT
CTGAAGCTAAAGGGTAGATATGAGGGCCTTCAGCGTCAACAAAGAAATCTTCTTGGTGAGGATTTAGGACCTTTGAATTCAAAGGA
ATTAGAGCAGATTGAGCGTCAACTAGATGGCTCTCTCAAGCAAGTCCGCTCCATCAAGACACAGTACATGCTTGACCAGCTCTCTG
ATCTTCAAAACAAAGAGCAAATGTTGCTTGAAACCAATAGAGCTTTGGCTATGAAGCTGGATGATATGATTGGTGTGAGAAGTCAT
CATATGGGTGGAGGGAGGAGGATGGGAAGGTAACGAACATAATGCTTCCTACGTGCATCATCAAGCTCAGTCTCAAGGACTATTCC
AGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTATGACAATCCAGTATGCTCGGAGCAGATAACTGCAACAACACAAGCTCAG
GCACAGCCAGGTTACATCCCAGACTGGATGCTCTGAAAGTCATGTGATCAATTCTAATGCTGTGATCAACCTCTCCAGCAAAAGAC
CCTGTTTTTTATATATAAATTTATTGACACAATTAAGACTTGGATTTGTAGACATAAGTGTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAD48303 MADS-box protein SEP1-a [Brassica oleracea var. botrytis]6266e-063
NP_001119230 developmental protein SEPALLATA 1 [Arabidopsis thaliana]6194e-062
NP_568322 developmental protein SEPALLATA 1 [Arabidopsis thaliana]6194e-062
XP_002873742 hypothetical protein ARALYDRAFT_909555 [Arabidopsis lyrata subsp. lyrata]6194e-062
AAA32732 transcription factor [Arabidopsis thaliana]6132e-061

Swiss-Prot top hits (Blast detail)Scoree value
P29382 Developmental protein SEPALLATA 16192e-063
P29384 Developmental protein SEPALLATA 25752e-058
Q39685 MADS-box protein CMB13772e-035
Q03489 Agamous-like MADS-box protein AGL9 homolog3692e-034
Q42464 Agamous-like MADS-box protein AGL9 homolog3692e-034

TrEMBL top hits (Blast detail)Scoree value
Q8GTF1 MADS-box protein SEP1-a6264e-063
Q5XXL8 SEPALLATA16192e-062
Q5XXN8 SEPALLATA16192e-062
Q5XXN7 SEPALLATA16131e-061
Q1KV06 SEP1 (Fragment)6013e-060

Arabidopsis top hits (Blast detail)Scoree value
AT5G15800.1 SEP1 (SEPALLATA1); DNA binding / transcription factor6191e-064
AT5G15800.2 SEP1 (SEPALLATA1); DNA binding / transcription factor6191e-064
AT3G02310.1 SEP2 (SEPALLATA 2); DNA binding / protein binding / transcription factor5752e-059
AT1G24260.1 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor3682e-035
AT1G24260.2 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor3682e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information