Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN49716

FASTA Sequence
Unigene ID: UN49716Length: 1072 SSR 
GGGTTTCACTCGTGGCCTCTCTCCCACCTCTTTCTTCCTTCTACATCTTCCCCCGAATCTCTCTCTCTCTCTCTAGATCCATCAAT
GGCGTCCCTCGTCGAATCCGGTTGTCAGTACCTTGTGACACATTTTAGCGACTTTCAACTGGCCTGCATCGGGAGTTTTCTCCTCC
ATGAAAGCGTCTTCTTCTTATCTGGCCTCCCTTTCATTTATCTAGAAAGGCAAGGCTTTCTCACCAAGTACAAGATTCAGGCAAAA
AATAACACACCTGCAGTTCAAGAAAAATGTATAACTCGCTTGTTGCTTTATCATTTCTGCGTAAACTTGCCTCTGATGATGGCCTC
CTATCCTGTCTTCAGAGCCATGGGAATGCGAAGCAGTTTTCCTCTACCCTCCTGGAAAGAAGTGTCTGCCCAGATATTATTCTACT
TCATCATTGAGGATTTTGTTTTCTATTGGGGTCATCGGATCTTGCATACAAAATGGCTGTACAAGACCGTGCACAGTGTTCATCAT
GAATATGCCACACCATTTGGTTTGACATCGGAATATGCTCACCCCGCTGAGATTCTGTTCCTGGGATTTGCTACCATAGTCGGGCC
AGCTCTCACCGGCCCCCACCTAATTACTCTCTGGTTATGGATGGTGCTGAGAGTGCTTGAGACAGTTGAGGCACATTGTGGTTATC
ATTTCCCTTGGAGCCTCTCAAATTTTCTTCCTCTGTATGGAGGTTCTGACTTCCATGACTACCATCACCGCCTCCTCTACACAAAA
TCTGGAAATTACTCCTCAACTTTTGTGTACATGGACTGGATCTTTGGTACCGATAAGGGCTACAGAAGACTGAAGTCTCTTAAAGA
AAACAGTGACTTGAAACAAACTTGAACTCGCCGGTTTGATGGTTTGCATAGAACAAAATGTCGTCGGAATTGTGGATTTGCGAGTG
TCCGTTTGCATCTCTGTGGAGGTCTTATTCTTAACCTTGTTTTCTCTTCCATTTTTAGTTTGTTGTGTGTCTAGAACTGCTACAAA
TGTGGCATCCTTAAAACGCATTTGGTACCTCAACTCTCGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889647 sterol 4-alpha-methyl-oxidase 2 [Arabidopsis lyrata subsp. lyrata]13992e-152
NP_563789 methylsterol monooxygenase [Arabidopsis thaliana]13784e-150
AAM64821 putative C-4 sterol methyl oxidase [Arabidopsis thaliana]13741e-149
AAF79571 F22G5.23 [Arabidopsis thaliana]13481e-146
XP_002881040 hypothetical protein ARALYDRAFT_481856 [Arabidopsis lyrata subsp. lyrata]13023e-141

Swiss-Prot top hits (Blast detail)Scoree value
Q55D54 Putative C-4 methylsterol oxidase DDB_G02697885842e-059
Q55D52 Putative C-4 methylsterol oxidase DDB_G02709465654e-057
Q9UUH4 C-4 methylsterol oxidase4982e-049
Q15800 C-4 methylsterol oxidase4973e-049
Q5R574 C-4 methylsterol oxidase4973e-049

TrEMBL top hits (Blast detail)Scoree value
Q8VWZ8 At1g0742013783e-150
Q8LBE1 Putative C-4 sterol methyl oxidase13749e-150
Q9LNW2 F22G5.2313489e-147
B6REN1 Putative C4-methy sterol oxidase12942e-140
B2BXV6 Putative uncharacterized protein12923e-140

Arabidopsis top hits (Blast detail)Scoree value
AT1G07420.1 SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase13791e-152
AT2G29390.2 SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase12885e-142
AT2G29390.3 SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase12643e-139
AT1G07420.2 SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase11173e-122
AT2G29390.1 SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase10611e-115

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
71  33%

Unigene MembersMember information