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Information for unigene UN49742

FASTA Sequence
Unigene ID: UN49742Length: 988 SSR 
GGATCTCTCTCTCTCAATTCTCTTATTGGATTCTTGTTTGTATCTCTCTCAACTCTCTTATTTGATTCTTTGATCATGATACTAAG
CAAGAGACCTCATCTAATGATCCGAAAACTGTCGGAGATGTTGGTTCCAAGAAGCCGGTCTGCTATCAAACCGGAAGATTATTCTG
CGAGTCCGAGAAGTCCGTTAGATTTGAAGTTTCCATCGCCGGTTAACTCGAAACGGTACGGTTCCGGTGGTGTCGGTTTGGGTATC
GTGGCTGCGCTGGAGGAAAGTAACACTGGGATTAACCGGTACGATCCGGTTTGTTTCTCCGGGAGATTCCGATGCCCTGAGATTGA
TCTGTCGGAAGAAGAATACACTTGCGTGACGAGCCGTGATGGGCCGACCAGAGTGTATTATAAGGAAGACGGGTTTGAATTGTTGG
AAAATGGGTCGGAGTTCGATGATCGGAGAAGGCAGAAACCGATGGTTGAACCACCGGTTACTAAGAGACAGGTTCGTAGGGAACCG
ACAGAGTTCCAGAGCTCGTGTTGCTTGTGTAAGAAGAGACTTCAAGGCAAAGACATTTACATGTACAAAGGAGAGATGGGATTCTG
CAGTGCAGAGTGTAGATCAGTGCAGATAATGAACGACGAGCGAAATGAGCAATCTAAACCGCAAGTTTCGAGAAACGTCGACGTTT
TGCGTTCTCCTTACGCCGCCGGCGAACAAACTTTCTCCGCCGGGATATTCGTATTTTAGGATAGCATAATAATTTACATTTAGAAT
AAAAAAAGAGTGATCACCATTCTATTTATAAGAAAAAAAGTAAGAAAAGAAAACAAAATGAATTGATAAAAAAAATGAAAATTTTG
GTTAGGTTAAAAGCAACTTGTATAGAAGCTTTGCTTTTGGTTTTGATTTTGGAATAACGTTTAATGTTTATATGTTTGGTTTCTAT
ATCAAATAAATCAATAAAAAAAAGCTAGAGTTGATTTAACAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565095 uncharacterized protein [Arabidopsis thaliana]8873e-093
AAM64456 unknown [Arabidopsis thaliana]8873e-093
XP_002887567 hypothetical protein ARALYDRAFT_895362 [Arabidopsis lyrata subsp. lyrata]8775e-092
AAD55282 ESTs gb|T04387, gb|R84022 and gb|T42239 come from this gene [Arabidopsis thaliana]8094e-084
XP_002893032 predicted protein [Arabidopsis lyrata subsp. lyrata]3524e-031

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GRN0 Expressed protein8872e-093
Q8LCV5 Putative uncharacterized protein8872e-093
Q9S7C1 F25A4.9 protein8093e-084
A5AP27 Putative uncharacterized protein3317e-029
Q9LMA6 T29M8.7 protein3201e-027

Arabidopsis top hits (Blast detail)Scoree value
AT1G74940.1 senescence-associated protein-related8933e-096
AT1G19200.1 senescence-associated protein-related3207e-030
AT5G20700.1 senescence-associated protein-related2275e-019
AT1G22160.1 senescence-associated protein-related1593e-011
AT1G78020.1 senescence-associated protein-related1389e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information