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Information for unigene UN49766

FASTA Sequence
Unigene ID: UN49766Length: 891 SSR 
GGGAGAGAGAGAGAGAGGAGAAGAAGGAGTTTGGTCGTTCGTCAATGGAGATCTCTGCTTCTCTAACTTTCTCTGGACTCGTTCCT
CGACTTCTCCCTCCCTTGTTCTATCCTCCTCAAGCTCGAACTACTTCCTGTGCACCATTTTCCTCTGCTAAACTCATTTCTCCTCC
TCACAGACGTATACCTCCCTCTCCCTGTCTCGCTGATCAGTCTGCCTCCACCGGGGTCAATGTTGTTGATTCAGATCCCATTGATG
CTGTTAAGAGGAAAGCTATAGACATATCCCCTCAACTCAAAGGAGCTTCAATATTTCTGGTTGGGATTAATAACCACATTAAAACC
AACTTGGGTAAGCTTTTGGCTGAGTCTTTACGATATTACTACTTTGATAGTGATAAGTTGATCGCAGAGGCGGCTGGTGGAAATAC
ATCTGTTCAAGCTTTGAAGGAGGCTGATGAGATGGCTTTTAAGGAATCAGAGACAGAAGTGCTGAAGTAGCTATCTTCTATGGGTC
GGCTTGTAGTTTGCGCTGGAGACGGTGCAGTCCAGAGCTTGACAAATCTTGCACTTCTAAGACACGGGATCTCCATTTGGATCGAT
GTTCCTCTAGAAATCGCAGCTAAAGGAGATGATCCATTCAGCTCGGAACCTTCCCCTGAGTTGTATGAGGCATTAAAAGCAAATTA
CGAAAAATCGAGAAAGGGTTACGATACAGCAGATGCAGTTATTTCCCTTGAGAGAATAGCTACAAAGCTGGGATGGGAAGACTTGG
AAACAGTAACTTCTGAAGAGCTTGCTTTGGAGGCAAGTCTTATGCTTTTTGATTATTACTCCCTCCGTTCCTAAATATAAGATGTT
CTAGTAAAACACGTTTATTAAGAAAATTAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877000 shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]9439e-100
NP_189325 shikimate kinase like 1 [Arabidopsis thaliana]9375e-099
XP_002328924 shikimate kinase [Populus trichocarpa]6005e-060
XP_002512880 protein with unknown function [Ricinus communis]5746e-057
ACU20382 unknown [Glycine max]5333e-052

Swiss-Prot top hits (Blast detail)Scoree value
Q9SJ05 Shikimate kinase, chloroplastic3181e-028
Q00497 Shikimate kinase, chloroplastic2713e-023
B0JFW8 Shikimate kinase2321e-018
Q31PU5 Shikimate kinase2132e-016
Q5N4D3 Shikimate kinase2132e-016

TrEMBL top hits (Blast detail)Scoree value
Q9LW20 AT3G26900 protein9373e-099
B9N0W2 Shikimate kinase6004e-060
B9RH21 Putative uncharacterized protein5744e-057
C6TEY0 Putative uncharacterized protein5332e-052
C6T2S3 Putative uncharacterized protein (Fragment)4132e-038

Arabidopsis top hits (Blast detail)Scoree value
AT3G26900.1 shikimate kinase family protein9372e-101
AT3G26900.2 shikimate kinase family protein9372e-101
AT3G26900.3 shikimate kinase family protein9372e-101
AT2G21940.1 shikimate kinase, putative3181e-029
AT2G21940.2 shikimate kinase, putative3181e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information