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Information for unigene UN49782
| FASTA Sequence |
| Unigene ID: UN49782 | Length: 762 |
SSR | | GAGAGAGAGAGAGAGAGCTTAAACCTACCCAACCATCAAATGGCGGACTCAGTTGCTGCTCAAACTCTGTCCCTCTCCGAGCAATA
TCATTTGGAGAAAGAAGTGAAGCCTGTTGAAGTTCAAGCTGAAGAGGTTGAAGCCAAGGAAGATTCTCCTCCCGAGGAAGCTGTTG
AAGACGAGTCTGAGTCTCCTGCTTCCACGGAAGTCACTTCTGAAGAGGCTCCTGCTGCGACTACTGAAGAAGAAAACACTACTGAA
GATGTTGCTGAGGAGACTCCTGATGAGATCAAGCTTGAGATAGCTCCTGCTGATTTCCGTTTCCCGACAACAAACCAAACCAGGCA
TTGTTTCACACGTTACATTGAATATCACAGATGTGTAGCTGCCAAGGGTGACGATGCTCCCGAGTGCGATAAGTTTTCAAAGTTTT
ATCGATCTCTTTGCCCCGGCGAATGGGTTGATAGGTGGAACGAGCAAAGAGAGAATGGAACTTTCCCTGGTCCTCTTTAAAACAAC
TCCTGCCTCAAAAGAAGAATCATCATCCTCTCTTGCTCTTGTTACCACTTCATAATGTCACCCGAATTACGCTGATAAGATTTTTA
CAAAGCCAGCATATCTGGTTGGTTCCTCATCATAAAAAAAATGTGAGAATTTAACATTTAATAGTCTCAAAATTTTCCTTACATTT
TATGTTCAACTCAAGTTTTGAGGATCATCCTGTTCTGATATGCTGTTCTTACTCTGATTATATTATTTTCCACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173661 cytochrome C oxidase 6B [Arabidopsis thaliana] | 556 | 5e-055 |
| AAM63485 cytochrome c oxidase subunit, putative [Arabidopsis thaliana] | 553 | 1e-054 |
| XP_002890515 hypothetical protein ARALYDRAFT_889753 [Arabidopsis lyrata subsp. lyrata] | 541 | 3e-053 |
| ACU14377 unknown [Glycine max] | 488 | 4e-047 |
| XP_002513958 cytochrome C oxidase polypeptide vib, putative [Ricinus communis] | 473 | 2e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O94581 Cytochrome c oxidase subunit 6B | 264 | 2e-022 |
| P14854 Cytochrome c oxidase subunit 6B1 | 217 | 5e-017 |
| Q5RCT0 Cytochrome c oxidase subunit 6B1 | 215 | 8e-017 |
| P00429 Cytochrome c oxidase subunit 6B1 | 211 | 2e-016 |
| Q7YRK6 Cytochrome c oxidase subunit 6B1 | 211 | 2e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S7L9 Putative cytochrome c oxidase subunit | 556 | 4e-055 |
| Q8LCP1 Cytochrome c oxidase subunit, putative | 553 | 8e-055 |
| C6SYQ4 Putative uncharacterized protein | 488 | 3e-047 |
| B9RJN9 Cytochrome C oxidase polypeptide vib, putative | 473 | 1e-045 |
| B9H706 Predicted protein | 470 | 3e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G22450.1 COX6B (CYTOCHROME C OXIDASE 6B); cytochrome-c oxidase | 621 | 6e-065 |
| AT5G57815.1 cytochrome c oxidase subunit 6b, putative | 365 | 3e-035 |
| AT4G28060.1 cytochrome c oxidase subunit 6b, putative | 346 | 5e-033 |
| AT1G32710.1 cytochrome c oxidase subunit VIb family | 164 | 6e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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