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Information for unigene UN49793
| FASTA Sequence |
| Unigene ID: UN49793 | Length: 1279 |
SSR | | AATTGAAATTGCTTATCTGTGATGATAGATTGAAAGAAAGAGTTGCTAGTTTTCTTACATGAATCCAAACAACATTAGGGGTCAAA
TGAACAAACTTACATGACTTAGACTTCATGACTCCACCAAGTCCCAGTCCAATTGCATACAGAAAAAGAAGACTTAAGAAAAAAGG
CTTTACAAATTTCTGAAAAATTCTCATTTGTATCTTTTCTTTCTTTGTAAACATCAAGAAGTCTCCTCCTTGAGCCTGTACAACGT
GATCTCTTGCTGCTTGAAGTAACGGCGATCCTCTTCGTCAACCAGGACGAGATTCAGATAGTACTTGACACTGAATTTGTTGTTTA
TGTTCTTATGCGTTGGCGTCAGATCGTATGGTGTCAAGAACAGTCTTAAGGTATCGATTCCCCTCTGACGGGAGCACCATCCATTA
ACTCAAATTTGGCCAATGTTTCTGTCTCGACGTGAGTATTAGCTCCTGCTCCTGTTGACTCTCGCCGTCTGATCTCAAGATCCATA
TTCTTTATCTTGATTCTCACCAGAAGAAAGTATACTTTCCCGAGGATAACATCTTTCAGGTGATACTTGCTTTTATTGTACTCAAA
CTCGATATGCAGGCAGTCCTCTATTCCAACTTCCATCTTGATGCTGTTGTTGATTGGAGGTAGTGGAGAATAGTTGCGTACCACAA
AGTCCTGGTACTCCACGATGCTTCCAGCATAACCACGTGTAAGTGTTACTTTGAGGACATACCTTAGCCGCACATTCACGCCATTG
TATGTCTCATATGGCATCTCAACGGTCGAAAATTCAAAAGGGTATGCCTTCTTTTCATATATTTCTCCAGGTACATCTAGCTCACG
CACCAGGGAAGTGAAGTCATAGAAGTTTCCTCTGTCAAAGTACATTTCTATTTGACCAAGAAGCTCAACTTTAACACCATTGTGCT
CCACTTTCTTCCCTTGATACGGTTCAATACAAACCTTGCCAGCAATAGTTTCTTGACTGTGAAAAATTGGGTTCATAACCATTTGT
CCATTATCTTTCTTAACCGGAACCTGTTTACGATTCTTCCCATCAATAAACGTGATTGAAACGCTACATGCAGGCTTGAAAGCTCC
ACGAAGATAATTCATGATTCAGAAGATTCGATCCCGATCACAGTAAACCTTCTGACAATGGCGAGAGAGAGAGAGGGAAGAAATGA
TCAAAAGCGACGAAGAATCTGACACTTGTTTGGGGTTGAAGACGATCATCGACAGAGAGTCACGGAACAAAACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200165 vacuolar protein sorting 26A [Arabidopsis thaliana] | 1222 | 7e-132 |
| XP_002865977 hypothetical protein ARALYDRAFT_331709 [Arabidopsis lyrata subsp. lyrata] | 1219 | 2e-131 |
| NP_194499 vacuolar protein sorting-associated protein 26 [Arabidopsis thaliana] | 1191 | 3e-128 |
| XP_002869547 hypothetical protein ARALYDRAFT_913758 [Arabidopsis lyrata subsp. lyrata] | 1191 | 3e-128 |
| XP_002274585 PREDICTED: hypothetical protein [Vitis vinifera] | 1162 | 6e-125 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9T091 Vacuolar protein sorting-associated protein 26 | 1191 | 1e-129 |
| Q6DFU4 Vacuolar protein sorting-associated protein 26A-B | 718 | 8e-075 |
| O75436 Vacuolar protein sorting-associated protein 26A | 716 | 1e-074 |
| Q6AY86 Vacuolar protein sorting-associated protein 26A | 716 | 1e-074 |
| Q0VD53 Vacuolar protein sorting-associated protein 26A | 715 | 2e-074 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FJD0 Vacuolar sorting protein-like | 1222 | 5e-132 |
| B9N808 Predicted protein | 1159 | 1e-124 |
| Q3HRZ1 Vacuolar protein sorting-associated protein 26-like protein | 1155 | 3e-124 |
| A9PCL0 Predicted protein | 1154 | 4e-124 |
| B9RPK9 Vacuolar protein sorting 26, vps26, putative | 1115 | 1e-119 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G53530.1 VPS26A (VACUOLAR PROTEIN SORTING 26A) | 1222 | 3e-134 |
| AT4G27690.1 VPS26B (VACUOLAR PROTEIN SORTING 26B) | 1191 | 1e-130 |
| AT4G27690.2 VPS26B (VACUOLAR PROTEIN SORTING 26B) | 1060 | 2e-115 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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