![](/radish/img/header.png) |
Information for unigene UN49829
FASTA Sequence |
Unigene ID: UN49829 | Length: 862 |
SSR | | GAACACATCTTTGAACTTTGCTTACTTGCAGATCTGTCCATTAACTAAGAACAAAGATTGTCTAAAAGAGTCCAGCTTTGCTGATA
ATATTCATTACATAGTCTTTCAAAAGGATGATACATGGTTTACCAATTCTATCAGGAACAGTTTGTTCATGCAATGCAAGGGCCCA
TCGCCTCATTGAAGTTTCAGAGCTTAACTTCCACATCCACACCAGCAGGAAGATCCAGCTGCATCAAGGAGTCGATGGTCTGAGCA
GTCGGGTAGAGAATATCAATCATCCGCTGGTGAGTCCTGATCTCAAAATGGAGCCTTGCATCCTTGTGGACGTGGGGAGACTTGAG
AACACAGTAGATACGCTTCTTGGTTGGCAAGGGAACAGGACCCATCGTCTTGGCATTGGTGTTCCTCGCAGCGTCGAGTATCTGCT
TGCATGAGTCCTCAATGAGAGGCACCCAGTATGATCTTAGCTTGATCCTAATCTTTTGCTTTGGCGCCATCTTATCCGCGTCTACA
CTTATCGAGGAAGAGCTCGGAACCTCGGAAAAGACATCAGAGGCGGGTTCTTCGAGGGTTTCTGGAGTTAGGGTCTCGGGAGCTGC
GAAGACCTTCTTCGTAAACGAGATGGAGGGTTTGTTAAGGACGCAGGAGCCAATGCCGCCATGAGTAGAAGAAGATGGAAGCAGAG
AGACTTTCTGTTTGGTGGAAGAAGAAGAAGAAGAAGATGTAAGGTTGGCGAAAGGGGGTAATATGAACGAAGTTACAGAAGAAACC
GCCATTGAATTTCCGGACAAAGAATCGTTCTTCTTCCTCCTCTTAACGCTTCTTCACAAGGATGTGGTTTGGTTTTCTCTTCCTCC
CC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
AAW22623 30S ribosomal protein S10-like [Brassica napus] | 892 | 7e-094 |
ABL97980 30S ribosomal protein S10-like [Brassica rapa] | 858 | 6e-090 |
ABB97026 unknown [Brassica rapa] | 802 | 2e-083 |
NP_187919 30S ribosomal protein S10 [Arabidopsis thaliana] | 795 | 1e-082 |
XP_002884945 hypothetical protein ARALYDRAFT_478688 [Arabidopsis lyrata subsp. lyrata] | 778 | 1e-080 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LK61 30S ribosomal protein S10, chloroplastic | 795 | 6e-084 |
Q9M4Y3 30S ribosomal protein S10, chloroplastic | 592 | 2e-060 |
P17009 Cyanelle 30S ribosomal protein S10 | 354 | 8e-033 |
B7K833 30S ribosomal protein S10 | 348 | 4e-032 |
P51286 30S ribosomal protein S10, chloroplastic | 347 | 5e-032 |
TrEMBL top hits (Blast detail) | Score | e value |
Q5MD13 30S ribosomal protein S10-like | 892 | 5e-094 |
A1YMX4 30S ribosomal protein S10-like | 858 | 4e-090 |
Q2V615 Putative uncharacterized protein | 802 | 1e-083 |
A5BC08 Putative uncharacterized protein | 607 | 5e-061 |
B9GFK3 Predicted protein | 586 | 1e-058 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G13120.1 30S ribosomal protein S10, chloroplast, putative | 814 | 3e-087 |
AT3G47370.2 40S ribosomal protein S20 (RPS20B) | 115 | 4e-006 |
AT3G45030.1 40S ribosomal protein S20 (RPS20A) | 115 | 4e-006 |
AT3G47370.1 40S ribosomal protein S20 (RPS20B) | 115 | 4e-006 |
AT3G47370.3 40S ribosomal protein S20 (RPS20B) | 115 | 4e-006 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|