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Information for unigene UN49885
| FASTA Sequence |
| Unigene ID: UN49885 | Length: 1140 |
SSR | | ATGTGGAGCTTTATATTTAAAAGCAACGAGATGGTAAACGTAACATACTCAAAGGCAAAATCTGATTCATAGACTGATTCCAAAAA
GAAAAAACGGTTTGGTTGTTCTGGTGGATTTACCAACCCGGGAAAATATGTGGTAAAGCAAAATGATCCTGCAAAGCTTGAAACCA
TGGAAAAGTCTTCAAGCGATAGATTGAAGTGCTCTCTCGAAGTTATCTTCGGCTGATGATACACGCTTCACAAGCACATGTTCAGG
GTGTGATAGTTTCAGCTGGCTTAAGTAACGTGAAGATGATTTGCCAACATGGAGACTGCAGACGACAAGGTTTGCAAGAGTTTCTG
GGTCTTTAGCATCCTTGTTGAGTGCTTCTAGTAGTAGCGATTCAGCTTCATCAAAGTTACCCATTTGCATACAGCAAACTGCTTTG
CTATTCAAAATCAAGCATGTCATCGGGTACCTCTCAAAAAAATCCTGGAAAATGAGATGAGCTTCTTGTATCTTCGAGCCACCACT
GCCAGGTTCAACCATGCGGTAGCAAGTTGGGTGAGAGTGTGGTCTTCGTCATACTGTTGCATCACTCTAAGCTGCTTCTCAGCGTA
ATCTGATCTGTGCATCTTAATGAATATCTGGACATTCAAAGCATGCAGATCCATTGTTCCTCCCGCATGAGTGTGTTTCAAAGCTT
CATTATAATCTTCCTCGTGCATGAAAATAGTACCAGCAATCAACCTCAAGATAGCATTGTTTCCTATAGTTGAATCGGCCAGCCAT
TCCTTCAAGCTTGAAATGGTTGATTCCTTATTATCAGGACTCGATAGATACATAGCGAGGAGCTTGACTGCCTGCAACGGAGTCGA
GGCGGCTTCATCGATCTCACTGATGACGAGCTGATAGCTACCGAGGGCGATGTACGAGCGGAAGACGAGGCAGTCGCGTTCCACTG
CGTCTTCAGGTGAGAGGTTGGGGATCTCGCTATTGTTGATCGCCGTTTGGTAAGCTCCGAGATAGAACGTGTTTCGGAGGTTGAAG
AGGTGATCTGGTCCTGCTCCTCCCATGCCTGCCATTGCTTGCTTGCTTGCTTGCTTCTTCCTCCTCTAGATCTTCACTCACACAGA
TCCCAAAACAACAGAGAATGCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_174351 coatomer subunit epsilon-1 [Arabidopsis thaliana] | 846 | 2e-088 |
| AAM65018 coatomer-like protein, epsilon subunit [Arabidopsis thaliana] | 846 | 2e-088 |
| NP_181030 coatomer subunit epsilon-2 [Arabidopsis thaliana] | 845 | 3e-088 |
| XP_002893638 coatomer protein epsilon subunit family protein [Arabidopsis lyrata subsp. lyrata] | 844 | 4e-088 |
| ABK94969 unknown [Populus trichocarpa] | 813 | 2e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SA78 Coatomer subunit epsilon-1 | 846 | 1e-089 |
| O64748 Coatomer subunit epsilon-2 | 845 | 1e-089 |
| Q9MAX6 Coatomer subunit epsilon-1 | 708 | 1e-073 |
| P0C541 Coatomer subunit epsilon-2 | 571 | 8e-058 |
| A2XY73 Coatomer subunit epsilon-2 | 567 | 2e-057 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PF16 Putative uncharacterized protein | 813 | 1e-084 |
| B9I0V9 Predicted protein | 808 | 4e-084 |
| B9SV80 Coatomer epsilon subunit, putative | 791 | 4e-082 |
| Q5QQ34 Coatomer epsilon subunit | 724 | 2e-074 |
| Q9MAX8 Epsilon1-COP | 721 | 5e-074 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G30630.1 coatomer protein epsilon subunit family protein / COPE family protein | 846 | 9e-091 |
| AT2G34840.1 coatomer protein epsilon subunit family protein / COPE family protein | 845 | 1e-090 |
| AT2G34840.2 coatomer protein epsilon subunit family protein / COPE family protein | 513 | 4e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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