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Information for unigene UN49931
| FASTA Sequence |
| Unigene ID: UN49931 | Length: 992 |
SSR | | GGAAGACAAGCAAAGTCCAACTCCAACCTTGGTAGACGAGAAAATTCTCGGAATGATGAGCGGAGGAGCCTTGTTCAGAAACGTCG
CCGCCCAGCTGATAAGACGGAACAGTGCGGCATCAGATCCGCTTGGCAAAACCGGAGCAAGATTGCAATCGAGGCGGCCTTATTTT
CCCGGGAGAGCAAAAGAAACAAGAAACGATCAAACCGGACTCTCACCTCCTCCTCCTCCTTCTTCCTCGTCTGTTCGTTTGGTGGG
ATGGTATCTTGGTATGGTGAAAGCACGCCCCGTTCTAACCAAAGGAATCACTTCTTGCCTTATTTACATCGCCGCCGATTTGTCTT
CCCAGACCATTACGAAGGATAAAACTTCTTCAGAATCGTATGACCTGGTGAGAACAGCAAGGATGGGAGCATACGGTCTACTTATC
TTGGGTCCTGTACAGCACCAATGGTTCGGTCTCATGTCAAGACTCTTCCCTAAACAAGATATCATCACAACGCTTAAAAAAATGGC
CATGGGACAGACTGTCTACGGTCCTACAATTATGGTGATTTTCTTATCATTCAACGCATTACTACAGGGTGAAGGCGGTTCTGATA
TAGTTGCTCGATTGAAAAGGGACCTTCTTCCCGTGATGTTAAACTGTGTCATGTATTGGCCTGTTTGCGATTTTATAACATTCAAG
TTCTTCCCTGTTCATTTACAGCCTCTTGTAAGCAACTCGTTTTCATATGTGTGGTCCATCTACATGACTTACATGGGAAATCGTGA
AAAACCAGCCGCAATTTCAGGCTGAAACACTCCGCCATTGCCTGTGATTGAAGGTAGTGTATACAGAACACATACATGGCCGATTT
TGTATTGTACTATTATTTTTGTTCCGCTCAGTACGGGGCAAACATTCTTAGTGTAAAGTCAACTTGGCTTTGTCCACAGTCATTAT
TTGAACCCAATAATGTACTTTGCATTCTACAAAGAGTGTAAAGAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179092 protein Mpv17 [Arabidopsis thaliana] | 850 | 7e-089 |
| XP_002885942 hypothetical protein ARALYDRAFT_480374 [Arabidopsis lyrata subsp. lyrata] | 849 | 9e-089 |
| XP_002867146 hypothetical protein ARALYDRAFT_491288 [Arabidopsis lyrata subsp. lyrata] | 768 | 2e-079 |
| NP_567940 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] | 751 | 2e-077 |
| XP_002527492 Protein SYM1, putative [Ricinus communis] | 674 | 2e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q4IPX8 Protein SYM1 | 222 | 2e-017 |
| Q66GV0 Protein Mpv17 | 199 | 9e-015 |
| P42925 Peroxisomal membrane protein 2 | 196 | 2e-014 |
| Q5TZ51 Protein Mpv17 | 179 | 2e-012 |
| Q2KIN6 Protein Mpv17 | 177 | 3e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O82324 22 kDa peroxisomal membrane protein | 850 | 5e-089 |
| Q9FPH4 AT4g33900 | 751 | 1e-077 |
| B9SNC3 Protein SYM1, putative | 674 | 1e-068 |
| B9HMX4 Predicted protein (Fragment) | 655 | 2e-066 |
| C6TEH3 Putative uncharacterized protein | 650 | 7e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G14860.1 peroxisomal membrane protein 22 kDa, putative | 850 | 3e-091 |
| AT4G33905.1 peroxisomal membrane protein 22 kDa, putative | 751 | 8e-080 |
| AT5G43140.1 peroxisomal membrane 22 kDa family protein | 565 | 3e-058 |
| AT5G19750.1 peroxisomal membrane 22 kDa family protein | 222 | 2e-018 |
| AT3G24570.1 peroxisomal membrane 22 kDa family protein | 151 | 3e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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