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Information for unigene UN49935
| FASTA Sequence |
| Unigene ID: UN49935 | Length: 775 |
SSR | | GGACATCTTGGCTTCTCTAGCAGCCAATCGCTTCTTCTTCTTCTTGACACTAGCAGACTTGTAACCACCTTTGCACGGCTTCCCCC
AAGGGCTAACCGACGTCCTACCTCTGCTCCACTACTTTTGCTCTTCCCTTCACCACCACCATGTGGATGATCATACGGATTCATCG
CCACACCTCTCACTTTGGGTCTTATCCCCAGCCACCTACTCTGTCCTGCTTTATACAGCTTCTTCACTCCATGAGACAGGTTCGAC
ACTGTACCGATGGTATCACGGCACCTGGCGTTGATCCACCTGGTGTCACCTGAAGGGAGCTTGATCAAGCACTTCCCTGAAGCAGG
CTCCTTGAGGATCTTGGCGTTTGTTCCCGCAGCTCGTACTAGCTTGGCGCCTTGACCAGGGTTCATCTCGATGTTGTGGATGATTG
TTCCTATGCGCATCATTCCTAGCGGCATGGAACTTCCTATCATTGAGTTGATGTCCATGTGGAGCATCTTTTCTACCATTTCTGCC
ACCAGTGTTTTGTTCTGCACATCACCAAAAGCTACCAACAAAGAAAATTAGAGGCCTTGAAGTATCTCTTGTCACCACGAAACGCA
CCCAAAAGAAAGACATCGGATTTCAGACACAAACGCTAGATGAATACTCTGGGATTAGCATATAACACCCAAGTATGAAGATGTAC
GTACTGAGAATAACTCAAGTCCCACAAAGTATTTAAAACATAGGTTTTTATGTACTAGATTCATCATTTTGAATACAACCATTGAA
G
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_566007 ribosomal protein L2-like protein [Arabidopsis thaliana] | 691 | 1e-070 |
| XP_002880081 ribosomal protein L2 family protein [Arabidopsis lyrata subsp. lyrata] | 690 | 2e-070 |
| AAM64400 unknown [Arabidopsis thaliana] | 683 | 1e-069 |
| CAA57902 ribosomal protein L2 [Arabidopsis thaliana] | 648 | 1e-065 |
| AAK95391 ribosomal protein L2 [Gossypium arboreum] | 530 | 5e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C8K6 60S ribosomal protein L2, mitochondrial | 430 | 1e-041 |
| Q2F969 60S ribosomal protein L2, mitochondrial | 430 | 1e-041 |
| P92812 60S ribosomal protein L2, mitochondrial | 430 | 1e-041 |
| P26859 60S ribosomal protein L2, mitochondrial | 393 | 2e-037 |
| B4U747 50S ribosomal protein L2 | 363 | 6e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZU4 Expressed protein | 691 | 8e-071 |
| Q8LCY4 Putative uncharacterized protein | 683 | 7e-070 |
| Q39213 Ribosomal protein L2 | 648 | 8e-066 |
| Q8VZZ6 Ribosomal protein L2 (Fragment) | 530 | 4e-052 |
| B9IJ49 Predicted protein | 512 | 5e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44065.1 ribosomal protein L2 family protein | 691 | 5e-073 |
| AT2G44065.2 ribosomal protein L2 family protein | 691 | 5e-073 |
| ATCG00830.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 295 | 4e-027 |
| ATCG01310.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 295 | 4e-027 |
| AT3G51190.1 structural constituent of ribosome | 222 | 1e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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