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Information for unigene UN49937

FASTA Sequence
Unigene ID: UN49937Length: 1121 SSR 
GGAGATTCCCATGAACGGGTCAAGCAAGATAAACATCTTTTTTGCAACTACCAGCGAGTTGTTTCCGAACATAACTCACTTACGGA
TCCACTCCTCTCTCTCTCTCGTTCTTGCAAGATTGCTATGTTAGATCCTTCAGCTAAAACCTACAGTCACCACTTGAGTTTCCCAA
CTGTTCCCAATGATCACTCAGATTCCGGCGTCTGTTCTCCTACTCTGTGGAGCACAAGTCCACCGAGGAGTCCTCTTCACCGGCCG
GAACACTACTCTAGCCTTTCGCCGGATTCAAAGGCTCAGGCTATCGCTCGTGGACAACGGGAGCTTATGGAGATGGTTAGTAAGAT
GCCAGAGTCGTGTTACGAGCTTTCCTTGAAGGATCTTGTCGAAGCGAGGGGAAACGAAGAGAATAACGACAGGAAGATCTTCGATG
AGTTGACTCAGAGAACAGGTAAGGTTGTGAGGAAGACTAAGAGTGGTAAACGGGTTGATCCGAGTGTAAACAACGGTGGGTTTCTT
CTGAAAATGATGTTTCCGTTTAGCTTTGGATCAAAGAAAGATACGGCGAAAAAGAAGAAGAAGAAGAAGAAGAGAAAGGGGAAGGA
TTCTGTTAAAGATTCTCAGGTTTCGCCGATACCTTCGATTTTTGATGAGTCGGTGAAAACAGAGGATAGAGAGTGGTGGAATAGGT
TGTTTGAGTCGAGGGGTAGTGAGAGCACAAAGAGGAGCGGTAGTAGCAATAGTAACAGGAGTCTAAGCAGCATAAAGGGATAAAAA
GAGTAGCTGCTTGTTGTCTTTCCTCTGGTTTGTACGTTCACGAGACTAAAAGCGAGTTCTAACTCAATGTATGGTGGTGACCGCTT
CTTGGCTAAATAAAAATGTTCCAAGAACAGAGGAGATGAGACCAGAGAGAATAAAACCTTTGAATGTGCCATGAAGATGACAACTT
TTTTGAATGATGCTTACATTTTTTTGTAAGCCTATGTATTGTTTTCGATACGGTTTTATCTGTGTAATTAGAGTCTAATGTGCACT
GATTATCTCTCAATTATGGAATTTTGAATCCTTCTTCATGTACAGTAAGTAGTATGTGTAGCTTAACTTTTTCTCTCCACTTGATT
ATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893161 hypothetical protein ARALYDRAFT_472375 [Arabidopsis lyrata subsp. lyrata]7154e-073
NP_173561 embryo defective 2170 [Arabidopsis thaliana]6903e-070
XP_002862501 hypothetical protein ARALYDRAFT_497423 [Arabidopsis lyrata subsp. lyrata]5613e-055
NP_177824 uncharacterized protein [Arabidopsis thaliana]5561e-054
NP_001154473 uncharacterized protein [Arabidopsis thaliana]5561e-054

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q52K83 At1g213906902e-070
O49284 At1g769805567e-055
B9GTQ4 Predicted protein4617e-044
B9H7L2 Predicted protein4402e-041
B9S2P7 Putative uncharacterized protein3838e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G21390.1 emb2170 (embryo defective 2170)6901e-072
AT1G76980.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: emb2170 (embryo defective 2170) (TAIR:AT1G21390.1); Has 33 Blast hits to 33 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 7; Plants - 14; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink).5564e-057
AT1G76980.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: emb2170 (embryo defective 2170) (TAIR:AT1G21390.1).5564e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information