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Information for unigene UN49952

FASTA Sequence
Unigene ID: UN49952Length: 1075 SSR 
ATAAGTAAACTACAATATATATGATCCAAAACCAATAGCTTATACAAACAGTGGGTTATTGTTTTACAAAAGTTTACAACATCTAC
AACCACACCCTCCAACTCATGAACCAAATCCTTTGTGTCCTGAATCCACAAACCACAAAGTTTTTTTCTTTCTTCCTGCTGACATT
AGCAAATTTCCCGTTAGCTATCCCTCGGTGTTTTTATGTCGTTATCATCCGTTGCAGCAGCTGTTTTACGGACGAACTGGCCACGG
ACACGAGGTCGTTGTTCCGCTAGTTTTTTCCTGCTTTGGTATCTTACCTTCTTTCTGAAGCACCTCTCCTTTCTCTTCTGGCGGAA
CTTTGTCAAAGCTGCTTCTCTTTGAGAGATCTTATTCTCATCTGCTACATTCCCACTTCCACTTCCACTTCCACTTCCACTACCAT
CGCCGCTTCCGCTTCCGCTTTTGCCAGCACCATTTTCACTTCCCATGTTCACTCCTCCAGCATTCATGCCATTACTGCTTCCATAC
GGGTCATTGCTTCCATGACCACTACCTGATCCACTTCCATTCACACTGTAATTCACTGTGTTGTTGTTGTTGTTGTTGTTGTTACC
TTCAACCGTCTCATTGTACACATTCGAGGATCCATATTGTGGTGGTAACTTCCGCTCAGGGACGTGAACCGGATTATAGGAGGAGT
GATGATGATCACAGGGTAGAGGCTGAAACAATGAACGCTTTGCTGATGAAGATCCTGCTGGGCTTACTTTTGGATCTCCAGGCTTT
GTGAAAGCGTTGTTCACAGTTGTGGAACTCATTTCCACGTTATTGCTACCGACGCGTGAGTGATGATTATCAGGGAGACTCTCGTT
CATGTTTGAGTGACAATCACATGCCGCTTCAGTCCTTTTTATAAGTTCTTGGCAATTATTATCATGACGAGCATTGCTTCCCAAGT
TCCCGCCAGAAATCTTATTGTTGTTTAAGGCTGGATTATACCTTGAGAAAGCTGAACCCTCTGAACGCCTCAGCACATTGCGGTCC
TCTCTAACTATTGTCTCATCATCTTTAGCTCCTCTATGCCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADA58346 pseudo-response regulator 7b [Brassica rapa]14547e-159
BAJ34554 unnamed protein product [Thellungiella halophila]12754e-138
XP_002873067 pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]12737e-138
NP_568107 two-component response regulator-like APRR7 [Arabidopsis thaliana]12469e-135
CAB86035 putative protein [Arabidopsis thaliana]12469e-135

Swiss-Prot top hits (Blast detail)Scoree value
Q93WK5 Two-component response regulator-like APRR712464e-136
A2YQ93 Two-component response regulator-like PRR373413e-031
Q0D3B6 Two-component response regulator-like PRR373413e-031
A2XFB7 Two-component response regulator-like PRR733217e-029
Q10N34 Two-component response regulator-like PRR733217e-029

TrEMBL top hits (Blast detail)Scoree value
D2KK92 Pseudo-response regulator 7b14545e-159
D2KK88 Pseudo-response regulator 7a11132e-119
B9SGT0 Sensory transduction histidine kinase, putative4232e-039
B9HM08 Pseudo response regulator3702e-033
B9HM09 Predicted protein3702e-033

Arabidopsis top hits (Blast detail)Scoree value
AT5G02810.1 PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator12473e-137
AT2G46790.2 APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator1999e-016
AT2G46670.1 pseudo-response regulator, putative / timing of CAB expression 1-like protein, putative1999e-016
AT2G46790.1 APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator1999e-016
AT5G60100.1 APRR3 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator1972e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

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