Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN49964

FASTA Sequence
Unigene ID: UN49964Length: 839 SSR 
GGGTTCTTCCATTATAGACGAATCTCTCTCCTTTAAATTTCCACCAACGCCTCTCTCTCTCTCTCGATTTCTTTATTGCCGGAGCT
CGTAGTTCCACGGCGGGGAGAGATGGCTCCTAACGATCCCAAAAACGGCGGTGGTTTCTTCGCGTCTCTTGCTTCCTCGATCTCAA
GTTTGGGATCGGCCATGACCAAATCAGTTAACGGTTTGGTTGGCTATGAGGGACTCGAAGTTATTAACCCTGAAGGAAGTACAGAG
GATGCAGCTGAGGAAGCAAACAGAGGAAGGTGGAAGCAAGAGGAAAGAGATGGCTATTGGAAGATGATGCATAAGTACATTGGATC
TGATGTTACATCAATGGTGACACTTCCTGTTATTATCTTTGAACCGATGACAATGCTCCAGAAAATGGCTGAGTTGATGGAGTACT
CGCATCTACTAGACATGGCAGACGAAACAGAGGACCCTTATATGCGCATGGTGTATGCCTCATCTTGGGCTATATCTGTGTATTTT
GCTTTCCAACGTACCTGGAAACCGTTCAATCCGATCCTCGGAGAGACTTATGAGATGGCTAATTACAATGGTGTTAACTTCATATC
CGAACAGGTCAGCCATCACCCGCCAATGAGCGCAGGTCATGCTGAAAATCAGTATTTCACTTACGATTGTACTTCAAAACTGAAAA
CCAAGTTTCTTGGCAATTCCATTGACGTTTACCCAGTAGAAGGACGAGGGTGACACTCAAAGAGATGGAGTGGTTCTTGACTTGGT
ACCTCCACTGACCAAAGTTCACAACCTAATCTTTGGACGAACTTGGGTTGATTCTCCTGGGGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882612 oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]10243e-109
NP_187541 OSBP(oxysterol binding protein)-related protein 3B [Arabidopsis thaliana]10154e-108
XP_002870951 hypothetical protein ARALYDRAFT_324883 [Arabidopsis lyrata subsp. lyrata]10073e-107
NP_195830 Oxysterol-binding family protein [Arabidopsis thaliana]10021e-106
XP_002532324 oxysterol binding protein, putative [Ricinus communis]9097e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q54QP6 Oxysterol-binding protein 83224e-029
Q9BZF3 Oxysterol-binding protein-related protein 63171e-028
Q8BXR9 Oxysterol-binding protein-related protein 63171e-028
O14340 Oxysterol-binding protein homolog C2F12.05c3152e-028
Q9BZF2 Oxysterol-binding protein-related protein 73117e-028

TrEMBL top hits (Blast detail)Scoree value
Q9SR33 Putative oxysterol-binding protein10153e-108
Q9LZM1 Putative oxysterol-binding protein10028e-107
B9T255 Oxysterol binding protein, putative9095e-096
C6TGH1 Putative uncharacterized protein (Fragment)8997e-095
A9PH21 Predicted protein8801e-092

Arabidopsis top hits (Blast detail)Scoree value
AT3G09300.1 ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B); oxysterol binding10152e-110
AT5G02100.1 UNE18 (UNFERTILIZED EMBRYO SAC 18); oxysterol binding / sterol binding10025e-109
AT5G59420.1 ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C); oxysterol binding8582e-092
AT2G31020.1 ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A); oxysterol binding2562e-022
AT1G13170.1 ORP1D (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D); oxysterol binding2552e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information