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Information for unigene UN49972

FASTA Sequence
Unigene ID: UN49972Length: 1145 SSR 
GGGCTTTGATAAATATCATTAATAAAAGCATACATTTAATTATAAATCTATCATAATATGAGAAAAGGAAACAGAAAGAGCTAGGG
TGAGATGCTGTAAATTACAATCAACTCATCTCCTAGTCTCTTGTGTATATCCATACATCTCTATTGCTTTGGGTGAGAGTCTTCCT
AAGGATCTGAATACGTGATCAAGTGTGTTTGTGTTCTAGAGTAACAATAAGCTATAACCATTTGACTGATGCCGCCTCCCAAATGT
CTCCCACTCACTCATCATCACCTCCTTCCTCCGCGTTGTCCTGCTCTTCGACCTGGGTTTCTTGAAAACTGGATCCGCAAATTTTT
GGAGTCCGGTTCATTTTCATCCATTCTATAGCCTTGCAGGGCGGTACGAGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAAAAA
AACATAGAACAACAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCTTTATATCCCAAAAGTGGTCGAAAT
ATATCTAAAAGACATACAGTTAAGGAGACTGACAGCACAAAAACATTCTTGAGTGATAAATGGTGTAAGAAGTATTGAAAACGAGC
CATAAAGAAAGGATACGAGATACTTCCCTCCTGGAGCAATTAGAAGGAAGTCCTTCGACAAATAGAGTGTTGGATGCATCTGGAGG
CAGACGAAGCAGTTCCCTTCCAGGTCTACCAACTAAATCTTGTTGACCAAAACCCAAATCTCGACCATTTGGAGGCCCAAAATCTG
GATGCGGAACTCCACCACGCCCAGACATAAGCTCACCCATGTCACCTCCTCTGCCGACACCATGAAACCGACCAGATTCTTCAGAT
GGCCTAGAAGACGTTTGCGCACTCTGAAGGTAGCGATCATAAGCTGAGCCAATAGTTCTCGTGTCTCTTACTGAACGAAGTATACC
TCGATCCTCATCCCGTGACACGTAATCATGGTCGAAGTCAGAACGGTGACGTTTCAGAGGACCTCCGTGTGGGATCGACGACATCG
GAGGCTGGTTCCAGTACCCATCTGCCATTGACGACGACGACGACGACGACGGCGACTGAAACAATACTTTCTAATTTTCGCCCGAT
TTCGATTTCAATTGGAGATTAACTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893157 hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp. lyrata]3382e-029
BAC42194 unknown protein [Arabidopsis thaliana]3221e-027
NP_177820 RNA recognition motif-containing protein [Arabidopsis thaliana]3221e-027
XP_002889109 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata]3221e-027
NP_001185414 RNA recognition motif-containing protein [Arabidopsis thaliana]3221e-027

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A1A6K6 At1g769403229e-028
Q8GYL1 Putative uncharacterized protein At1g76940/F22K20_233229e-028
B9GTK9 Predicted protein2815e-023
C6TB71 Putative uncharacterized protein2663e-021
B9T444 Putative uncharacterized protein2637e-021

Arabidopsis top hits (Blast detail)Scoree value
AT1G76940.1 RNA recognition motif (RRM)-containing protein3315e-031
AT1G21320.1 nucleic acid binding / nucleotide binding3172e-029
AT1G21320.2 nucleic acid binding / nucleotide binding3172e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information